Detail



ID : Ahg349229

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|349229|fgenesh1_pg.C_scaffold_5002621
Sequence
ATGACTTTCT CAAAACAATT CCCTCTTCTT CTCTTTTTCT TCTTCTTCTT CTTCCCTCTC CTAAATGCCT CAGAACCAAA ACGTTGCTAC AGTTCCTCCA CAGGAGGAAA CAACCTTGAC GTTAGGTTCC CTTTCTGGCT ACCCCCTGAT CAATCTTCTT CCTGTGGCTA CCCAGGATTC AACCTCCATT GCACCGATCG TCATAAGACA GCCTTAAAGC TTCCAAACTC CGGATCATTT CTCGTCCGAG ACATAAAATC GCAGCGTATT CGCCTCAGCG ACCCTGATAA CTGCTTAGCC AGACGGCTTC TCAGCTTCGA CGCTTCAGGG TCTCCTTTTT CTCCTCTTCA CCTTGTCAAC TACACTTTCT TGAGCTGTCC TACCGAAAAC GTCAAATCCT CTTCTTTGGA ACCCATCCAT TGCCTTGGTA ACTCCACAAC CTCCTTCTTA GCCACACCTT CAGATCTCAC CGGTTCAATG CCGTCCTCTT GTCAAATCTC CAAGACACTA CTTCTTCCGG TCTCTTCACC ACTCGCCGTT GACCTCAACA AACAAGACCT CTGGCTGAAA TGGGACTCAC CGGATTGCAC AGGTTGTGTT GATTTTAGTC CGTTATGTGG CTTCATAAAC AATACCACCC TCAAAGTCAA ATGCTTCGCA TACGTTGATT CCGGAAACCC CTGGTTAATA ACGTTAAAGA TATTGTGCTT ATGCCTATCG GTACCATTCT TCCTAGTGAT AACTCCTGCC CTCTGTATCA TTTTTATCCC AATCCAAAAC CAAAAATCCA AGAATGTCCC TTGGCGAAAT GATACTCTCT GTCCCATTTG TTTATCAGAA TACACAAGTG AAGAGACCGT TAAGTGCTTA CCCGAATGTG AACATTGCTT CCACACCGAA TGCATCGACC CGTGGCTCAA GTTGCATAAT TCTTGTCCGG TTTGTCGGAG TCCATATTGA 
Length960
Protein Sequence
Protein Residue
Map Locationscaffold_5: 19343456.. 19344531
Download Sequence
A.thaliana
AGI-codeAT5G36001.1
DescriptionRING/U-box superfamily protein
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
22.9347 Ahg492590 ACT domain repeat 7
23.6643 Ahg481464 Protein of unknown function (DUF778)
26.7208 Ahg333080 RNA recognition motif (RRM)-containing protein
30.9839 Ahg935251 Ypt/Rab-GAP domain of gyp1p superfamily protein
33.7343 Ahg489075 Polynucleotidyl transferase, ribonuclease H-like superfamily protein
34 Ahg476928 Integrase-type DNA-binding superfamily protein
42.8135 Ahg487372 arginine-tRNA protein transferase 1
49.295 Ahg476589
54.6077 Ahg484026 phosphatidic acid phosphatase 1
71.5821 Ahg480590 NAC domain containing protein 36
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression