| Annotation |
|---|
| Description | jgi|Araly1|487372|fgenesh2_kg.6__506__AT5G05700.1 |
| Sequence |
GATTATGTCT TTGAAAAACG ATGCGAGTAG TAGCCACGAC GGCAGAAGCA ACGGAGAAAG CGTAATCGAT GATCATGGCC GCCGTAGAAG CACTTGCGGC TACTGTAAAT CCCCAGCTCG GTCCAGTACC TCTCACGGTT TATCAGCAGA GACTCTTACC GTTTATGACT ACCAAGCTCT TATTGACCGA GGCTGGAGAC GATCTGGTTC TTATCTTTAC AAACATGAGA TGGATAAAAC TTGTTGCCCT CCTTATACGA TCCGTTTGAA AGCAAGTGAT TTTGTTCCTA CTAAAGAGCA GCAGCGAGTT TCTAGGAGAC TAGAAAGGTT CTTGGATGGC AAACTCGATG TGCAGCCCAG GGAACATACA GGTGCTTCTT CCTCTCGTGA AGTTTCAGAT GCAAGGAGAA AAACACTTGG AGCTGCCAAA AGTGAAGAAA AGAATAAAGT TGAACCAATT ATGGATGATT TGTCTAAAAA GATTGACCAA GCTGTGCAAT TATGCATACG GAGTGGAGAA TTCCCTTCTG ATATGCAGAT ACCAAAAGCT TCAGTGAAGA AGGTTTTATG TGCTAGAAGA AAGAAACTAG CTGAAGGAAC AGAACAACTC TTATACACCA GCAACATTGC TTTTCCAATA GCAGCTGCAA TAAAACGCAC CCAGAAATCT GAGAAAGGGG GGATAAATAG TGCAGAAGGA AACAGATTAT CACCTGAAAC TATTTCGGAG ATGTTGTTGA GTGCGATACA TAAGGTGGGG GAAACTCATG ATATGTCTAT TAAAGTCTGT AAGGGCCATA TCAATTTCCT TTCAGCTGCC AAAGATTCTT TCTCTGATAG AGATGTTGTA CCTAATGGTG ACATCTCGAG AGGAGCCAAT TCAACAGGTG GAAGTGAAAC CCTTCATGCT AAGACGGATT CAGAAAACCG TCAGGCAATA AAGCGAAAGC TGGAGATACA TTTGAAAAGG TCTAGTTTTG ATCCTGAAGA ACATGAGTTA TACAAACGGT ATCAGCTAAA AGTGCACAAT GATAAGCCAG AGCACGTAGC AGAAAGTTCT TACAGAAGGT TTTTGGTCGA CTCTCCTTTA ATAGACGTTC AACCTTCAGG TGATGAAAAG GTTCCGCCTT GTGGCTTCGG CTCTTTCCAC CAACAATATA GAGTTGATGG GCTTTTAATA GCTGTCGGGG TTGTTGACAT TCTTCCTAAA TGTTTGTCAA GTGTATACTT ATTCTGGGAT CCAGACTATG CATTCTTATC GCTCGGGAAA TATTCTGCCA TGCAAGAAAT TAATTGGGTC ATAGAAAACC AAGCTCACTG CCCTTCTCTT CAGTATTACT ACCTTGGCTA TTATATACAT TCCTGCAGGA AGATGAGGTA TAAAGCAGCC TATTGTCCAT CTGAGCTTCT ATGTCCTCTT CGTTTCCAGT GGGTTCCATT TGAAATAGCG AGGCCTATGC TTGATAAAAA GCCATATGTC ATCTTGTCCG ATATCGCCAT TTCACAGAAT CAATGTTCTT TACTAGCTGG TGCTTCTGAA ACTCTAGCGG AACCAGCAGC TAGTGAACAT GAAGACATGG AACAAGGGGA GACGAATGAT AATTTTATGG GCTGCAGTGA TGATGAGGAT GAGGATGATG ATGAAATGGA TGAGACTGAA TCAGAGGACT CTCATATTGA GTCAGACCCT GGATCCAAAG ATAACGACAT TAACAACATT CTTATCGGTC TATATGGATC CCAATATAGA TACAAGGATA TGCGGCAGAT CATAACTCCT GTAGGCCGGA AGCAACTGGA ACCGATGTTA CAAAGCTACC GCAAGGTTGT CGGGGACGAG CTATCAGAGA GAATGGTGTA TGAAATCAAC TAAAGCTTTA ATAATAATAC CAAAGCTCCA TTGAGGTTAG TACCATTAGT TATCAGATAA AACTCAAAAT TGTTTGAATC CATGTTTCAG TTGTTGTATA TCTATGAGAC TTGTACATGG TATCCTTCTT TAAGTTTGTT ATGTTCACTT TTTCTGATTA CCTTTATATA ATCATATTGA AATTTTCTGC CTAAGAAGTT GAAATGTTAT TGGATTTGGG TTTTTAATGG ACTTTGAAAT TATGGTACAT ACATATGGTT TTGTTATGCT TTTTATTTTT T |
| Length | 2151 |
| Protein Sequence | |
| Protein Residue | |
| Map Location | scaffold_6: 2016652.. 2019663 |
| Download Sequence |
|
| A.thaliana |
|---|
| AGI-code | AT5G05700.1 |
| Description | arginine-tRNA protein transferase 1 |
| TAIR curator summary | Encodes an arginyl-tRNA:protein transferase (ATE1), a component of the N-end rule pathway that targets protein degradation through the identity of the amino-terminal residue of specific protein substrates. Arabidopsis contains two ATE genes: At5g05700/ATE1, At3g11240/ATE2. Another component of the N-end rule pathway is At5g02310/PROTEOLYSIS6 (PRT6). PRT6 and ATE were shown to regulate seed after-ripening, seedling sugar sensitivity, seedling lipid breakdown, and abscisic acid (ABA) sensitivity of germination. Mutants of ATE1 also display delayed leaf senescence. |
| Alias | [ATATE1][ATE1][DLS1][arginine-tRNA protein transferase 1][DELAYED LEAF SENESCENCE 1] |
| Gene coexpression |
|---|
| MR |
| MR | Locus | Description |
| 4.47214 |
Ahg496128 | Histone superfamily protein |
| 5.09902 |
Ahg492730 | sphingosine kinase 1 |
| 5.09902 |
Ahg489258 | Protein of unknown function (DUF819) |
| 5.65685 |
Ahg472300 | DNA-binding bromodomain-containing protein |
| 9.94987 |
Ahg931939 | PP2C induced by AVRRPM1 |
| 10.198 |
Ahg922097 | multidrug resistance-associated protein 12 |
| 10.7238 |
Ahg339887 | S-adenosyl-L-methionine-dependent methyltransferases superfamily protein |
| 15.6205 |
Ahg931278 | RING/U-box superfamily protein |
| 21.4476 |
Ahg911775 | Transducin/WD40 repeat-like superfamily protein |
| 21.4942 |
Ahg489425 | rhomboid-like protein 11 |
|
| RNA-seq |
|---|
Seasonal expression (July 2011 to June 2013) |
|
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| The four seasons |
|
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| Growth Chamber expression |
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