Detail



ID : Ahg350453

Blast(Query) A.halleri   /   A.thaliana (NOT RECIPROCAL)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|350453|fgenesh1_pg.C_scaffold_6001046
Sequence
ATGAAGTCTG GTGTCATCAT AACCATTGCT CTGTTATTAT TCACAAGCTT TGTTCTTGTT TGTGTAGCGA AAGAGTGTAC AGACATTCCT ACCAAGCTCT CATCGCATAC TTTGCGCAGC GAGCTTCTGC AATCACAGAA CGAAACTTTG AAGACAGAGT TGTCCTCTCA TTACCATTTA ACTCCAACTG ATGACGCCGC TTGGTCTACT TTGTTGCCAA GGAAGATGTT GAAAGAAGAG ACGGATGATT TCGCTTGGAC TATGTTGTAT AGGAAGTTCA AGGACTCTAA TTCCTCTGGT AACTTTCTCA AGGACGTCTC TTTGCACGAC GTTAGGCTCG ACCCCAGCTC CTTTCATTGG AGGGCTCAGC AGACAAACCT TGAGTATCTA TTGATGTTGA ATGTTGATGG TTTGGCCTAT AGCTTCCGTA AAGTTGCTGG TCTTGATGCT CCTGGAGTTC CCTATGGAGG ATGGGAGAAA CCAGATAGTG AACTCCGTGG CCATTTTGTC GGTCACTATT TGAGTGCAAC AGCTTATATG TGGGCAAGTA CTCATAATGA TACTCTCAAG ACGAAAATGT CAGCTCTTGT CTCTGCTTTA GCGGAATGCC AGCAAAAATC TGGCACAGGA TATCTCTCTG CTTTTCCTTC CAGTTTTTTC GACCGGTTTG AAGCTATAAC ACATGTTTGG GCTCCTTACT ACACCATTCA CAAGATTTTG GCCGGCCTGG TGGATCAATA TAAGTTGGCT GGGAATACTC AAGCTTTAAA GATGGCAACA GGGATGGCTG ATTACTTTTA TGGCCGTGTT CAAAATGTGA TAAGGAAGTA CAGTGTTGAA CGACATTGGC TATCACTAAA CGAAGAGACT GGTGGCATGA ATGATGTTCT TTATCAGCTA TACAGCATCA CTCGAGATTC CAAGTATTTG TTTCTCGCAC ATCTCTTTGA CAAGCCTTGC TTTCTCGGGG TCCTCGCAAT TCAGGCCGAT GATATTAGTG GATTCCACGC TAATACACAT ATTCCCATCG TCGTTGGATC CCAACAACGA TATGAAATCA CTGGTGATCT ACTCCATAAG GAAATCTCGA TGTTCTTTAT GGACATAGTT AATGCTTCTC ACAGCTATGC AACTGGAGGA ACATCAGTCA AAGAGTTCTG GCAAGATCCA AAGAGAATGG CGACTACACT GCAAACTGAA AACGAGGAAT CATGTACTAC TTATAACATG CTCAAGGTCT CTAGGAATCT GTTCAGATGG ACAAAAGAGG TTAGCTATGC AGACTATTAC GAGCGCGCTT TGACCAACGG TGTGCTTGGA ATTCAAAGAG GAACCCAACC CGGACGGATG ATCTACATGC TCCCATTAGG TCAAGGTGTT TCTAAGGCTG TGACTTATCA CGGTTGGGGA ACACCTTATG ATTCCTTCTG GTGTTGCTAT GGCACTGGAA TTGAATCCTT TTCAAAACTG GGAGATTCCA TATATTTTCA AGAAGATGGT GCATCTCCAG CTCTTTATGT CACCCAATAT ATATCAAGCT CACTTGATTG GAAATCTGCT GGTCTTTTGC TATCTCAGAA AGTTAATCCT GTTGTGTCGT GGGATCCGTA CATGCGTGTG ACATTCACTC TTTCTTCTTC CAAAGTGGGA GTGGCGAAGA AGTCGACTTT GAATCTAAGA ATTCCTGTTT GGACTAACTC TATAGGTGCC AAAGTATCTT TGAATGGGAA ACCCTTAAAA GTACCAACTT CAGGTAATTT CCTATCGATC AAACAGAACT GGAAATCTGG CGATCAAGTA ACCATGGAGC TACCAATGAG TATCAGAACC GAAGCTATAA AAGATGATCG TCCGGAGTAC GCATCTCTTC AAGCCATACT CTATGGCCCC TACTTGTTAG CCGGACACAC GAGCAGGGAC TGGAGCATCA CAACTCAGGC TAAAGCTGGA AATTGGATAA CCCCTATACC TGAAACTTAT AACAGTCACC TTGTCACACT CTCACAACAA TCTGGAAACA TATCTTACGT GTTGTCAAAT ACCAACCAAA CCATCACAAT GAGGGTATCA CCCGAGCTAG GGACACAAGA TGCCGTTGCA GCGACTTTCA GGCTCGTGAC TGATAATTCT AAACCACGGA TATCGGGTCC AGAGGCACTA ATTGGAAGCC TGGTCATGCT TGAGCCGTTT GATTTCCCTG GCATGATTGT AAAGCAAGCA ACTGATAGCT CCCTCACGGT TCAAGCTTCT TCTCCTAGTG ACAAAGGAGC TTCTAGCTTT CGGTTAGTAT CTGGAGTTGA TGGGAAGCCA GGAAGCGTGT CGTTAAGACT AGAGAGCAAC AATGGTTGTT TTGTGTACAG CGATCAAACA CTAAAGCAGG GGACGAAACT AAAGCTTGAA TGTGGTCCGG TTGCGACTGA TGAGAAGTTT AAACAGGCAG CAAGCTTTAA GTTAAACACA GGAATAAATC AATACAATCC AATGAGTTTT GTGATGAGCG GAACACAGAG GAACTTTGTG TTATCGCCAT TGTTTAGCTT AAGAGATGAA ACATACAATG TGTACTTCAG TGTGCAAACT TAA 
Length2583
Protein Sequence
Protein Residue
Map Locationscaffold_6: 4978502.. 4982224
Download Sequence
A.thaliana
AGI-codeAT5G12960.1
DescriptionPutative glycosyl hydrolase of unknown function (DUF1680)
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
46.4543 Ahg926577 PATELLIN 1
62.6259 Ahg927929
71.0493 Ahg496923 GRAS family transcription factor
78.1345 Ahg484447 CCR-like
91.515 Ahg478377 serine carboxypeptidase-like 7
95.5615 Ahg472690 glutathione S-transferase tau 13
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression