Detail


ID : Ahg351970

Blast(Query):  A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|351970|fgenesh1_pg.C_scaffold_6002563
Sequence
ATGGAATCTC CGGCCCAACG GATTAGGTGG GAGCTTCTCA GAACTTACGA CCATTCGTTT CCCTTGAGTG ATTATTCACC TGAAACCAGA GCTTCTTTAT TTTCCTCTGA TTTGCAAACC CTAGAACATG AGTTTGGAAG ATTTGATATC TCCGAAGAAA ATAATTGTGT TAATGGGTAT GATGCTCGTA GGTCATATAA CTATGATTTT CATGAACGTA GTCGTAGTGC TAGTGTCATG GGTTCTCCAT ATCCTCCCTT CAACGGAAAT TTAGTAGACG TTCCTTTTTT TCCAAGTAAT CCTTTCTTTG ACCAAAGCCC TTGGAGTGAT GCATATGGTT ATATGTCTGG AATCCGCAAT ACTCTATTAT CGCGTGCTAA AGACCGTATA GAGTCTCGCC TGTTGCAAGA TGTGATTGCC AAGGGTTCAA AGGAGACAAT TGATAAGATA TTTGACAATT TGATCTCAAA TGTTTGTGAA TTGATGCTTG ATCCTTTTGG CCATCGCGTC TTTGAAAAGC TTATGGAGAA ATGCACCGAT GAACAGATCA CTCGGGTTTT GGATATAGTC CTTCAGCAAC CTCTTCAATT TGTTAGGCTT TGTGTCGATT CACACGGAAC CCGTGCAATA CAAGATTTGA TGCGAAGTCT TTGTTCTGTA GAGCAAATAG CTCGGTTCAT GGCAACACTA TGCCATGTTG CACTTCTATT GACCAAAGAC GCTAATGCTA ATCTTGTGAT TTTGTTCTGC TTCAATCACT TTTCTCCTTC ACATAGCAGA TATCTTCTTG AAGTGATTGT TCAAAATTGT TATCAAGTTG CAATTGATCA ACATGGATAT TGTATGCTTA ACCAATGCAT TAGACAATCC TCTCGAGAGC TAAGAGACCC TTTGATTAAG GAGATAATCA CTAATGTTGT GAGATTATGC AAGAATTGCT ACGGAAACTA CGTGGTGCAA TATGTGTTGG ATTTGGAAGA TTGTGAGGTT ACAAGTGCTC TCTCGAAACA TCTTGATGGA AATTACGTGC AACTCTCTTA TGACAAGTAT GGGAGTCACG TGGTGCAGAA GTGTTTGGAA AATAGAGAAT TTTGCTCCAG GAGGATCATA GCCGAGCTGC TAAGTGACAT TGATTCTCTT CTTGTAGATC CGTTTGGAAA TTATGTGATT CAGACCGCGT GGATTGTATC CGAGGATCAT ATGCGAAATG TATTGTTGTA CCATATAAAC AGAAATGTTT CATTCATGAG GTGCAACGTA TATGGGAGAA AATTACTCCA GAAACTCAAT CTTTGGAGAT AG
Length1302
Protein Sequence
Protein Residue
A.thaliana
AGI-codeAT4G08560.1
Descriptionpumilio 15
TAIR curator summaryEncodes a member of the Arabidopsis Pumilio (APUM) proteins containing PUF domain (eight repeats of approximately 36 amino acids each). PUF proteins regulate both mRNA stability and translation through sequence-specific binding to the 3' UTR of target mRNA transcripts.
Alias[APUM15][PUM15][pumilio 15]
Gene coexpression
MR
MR Locus Description
2.23607 Ahg919343 LOB domain-containing protein 2
10.9545 Ahg947721
14.6969 Ahg929490 F-box and associated interaction domains-containing protein
18.3303 Ahg336658
18.3303 Ahg938791
20.6398 Ahg472005 Wall-associated kinase family protein
20.7364 Ahg491810 Phospholipase A2 family protein
21 Ahg900245
23.9374 Ahg473666 MLP-like protein 165
25.5147 Ahg916018 beta-galactosidase 14
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression