Detail



ID : Ahg929490

Blast(Query) A.halleri   /   A.thaliana (NOT RECIPROCAL)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|929490|scaffold_301947.1
Sequence
CCGCGCAGAA AGCTAGGGTT AAAATGAAAC GTCTAAAGGC GCAAGAGAAG CTTCCAATGG AGTTGGAGGA GGAGATACTC TCTCGGCTTC CTCCTTTATC TCTCGCTCGC TTCAGAACTG CTTGCAAACA ATGGAACACT CTTATCGTTG ATAAGAGATT CATCGACAAC CACTTGGCTC GTGCCCGTGC CCACCCTCAA TTCATCTTAA CGACCAAATC CAAGTTATGT TCGGTAAGCG TCAATCTCAG TGACGCAATA AAGATAGAGG TGTGTGATTT AACCTTAGAT CATATCCACG GTTTAGAATC TGAGATGACA CCTAGAAAAA TCCATCATTG TGATGGCTTA TTGCTTTGTT GTTGGAACAA TGGAGCCACA GCCACTGTTT GGAACCCGTG GTTGAGACAG AGTAGATGGA TCGAGCTTGA TACAACAGAA ACTCTAACGT GTTTTGCTGG CATAGGATAC GACAATAGGA AACCAGAAAA CTGTGATTAC GAGATCTTTG CGTCTCAATA TAGTTACAAA TACGTGTGGA AATTCTTCAA CTTTGCTTCT AATGCGTGGA AAGAACAAAA CTCCAACACT TGTTACAGCA GTATTCGTGG TTTTACTAAG GGTGCAAATC TTAGGGCATC CTCTAGTGTA TCCTTGAATG GGAATTTGTA TTGGGTTGCA TCTTGTATCG CCTTTAAGAA CTTGTTCATC ATATGCATGG ATTTTTCGCA AAAGAGATTC GAGCTCTTTT GTAATCTACC ATGTAAGAAG ATATGTCGTT TTGATACTCA AGTCCTTGCG GTTTTTAGGG GAGACCGGTT TTCGGTGTTA GATCAATGCA ATGAAACAAA GAAGATTGAG ATTTGGGTGA CCAAGAACAA GATTACTCGG GATGGGAAAG ATGTGGAATG GATGAAGTTT ATGGAAATGT CATGTCCTAA CTTGCCTGAT TTAGTACAGT CCCGACCCTA CTCTCGGCCA AGTTACTTCA TCGAAGATAA AACGCTCATC GTGTGTTCTT GTGACAAAGC TGGACAGGCT TGGATCTATG TTGTAAGGGA AAATAAGCTG AGTACAATTC GAATAGATTA TGTGGTTGAT CCTTGGCCTT CGCATTGTAC CTGTTTTCCC AGTTTGGTCC CGGTTCCTCG AGGTCAAGGA GAAGAAGTAG AACTACGAGT TTAGTTTTAT AACAATTTGC CTTCTTT 
Length1207
Protein Sequence
Protein Residue
Map Locationscaffold_3: 6632081.. 6633275
Download Sequence
A.thaliana
AGI-codeAT1G47390.1
DescriptionF-box and associated interaction domains-containing protein
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
7.34847 Ahg478254 eukaryotic initiation factor 4A-III
10.3923 Ahg937315 TRAF-like family protein
14.6969 Ahg351970 pumilio 15
22.0454 Ahg474736
25.7876 Ahg345092 Protein of unknown function (DUF810)
29.6985 Ahg495065 ethylene response factor 110
32.7109 Ahg921069
35.5809 Ahg925862 S-adenosyl-L-methionine-dependent methyltransferases superfamily protein
37.8286 Ahg933779 Domain of unknown function (DUF313)
44.1248 Ahg935596
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression