Detail



ID : Ahg352229

Blast(Query) A.halleri   /   A.thaliana (NOT RECIPROCAL)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|352229|fgenesh1_pg.C_scaffold_6002822
Sequence
ATGGAGAAGG CAGACAGCTC AAGAGAAGAT TCAAAATGGG CAACTCTAGA CAGAAACATA CTTGCCATTA TCTTCGATAA GCTCGACATA ATGGACATTA CCATGGGAGC TTCACGTGTA TGCATCTATT GGTTCCTTGT CTCTCACAAC ATAACTCTAT GGAACACCAT CGACCTCTCC AAGTTCCAAC ACAAGGGCAA AAACGTCATC TACAAATACA GGGTTGACGA TGAAGTAGAA GAAGCCCTAA GATTTAGTAA TCTTTTAATT AAGATGAGCC ACTTCTTCTT TAACTTTTGT GAAGTAAAAG GCATAAAACT CCGGAATCTA TTGATTGAGA TCACTAAGTT GAGTCGCACG GCCCCAAAGA ATTTATTCTT TAACTTTTAT TCCAATATAA AAAAGCAGGA TCTCATGTTT GTTGCTGAGA GGATGCCAAA CATAGAGAAG CTTGCTTTAC CGGTTTCATG GTCACTGTGT AATGCGGTGA ACTCATTTAG GTTTGCGTTT AGTCAGTGGA AGAATCTTAA AACACTGATC ATGGCTCATA ATGACTTTTT CATCTGGCCG TACACATTTG AGTTTCGAGT TGTGGGAGAG AACTGCAGTA ACCTGAATAA CTTGAAGATT ATGGGTTATT TGGATAACAA AGATGCTGTG GAAATCGTGC GTTACCTCCA GAGCCTCAAG AGGTTGAGTT TACAATGCTC TTTGGTCACC GTTGAAGGAG TTCTCTCGCT AATAAGAGGC CTTGAAAACC TCGTGATCTT TAACGTGACA CATTGCAAAT ACTTGGATTA TAATCCTATC ACGATGAATA TTATTGTACA AGCTGCCACT CAGAAGCTTG AAAAGTTTAT CATATGTTCA GAAAACGATT GCAAGGTTTG CAAAGATCGA CCTAACGTAC TCCGGCTACA TGGTTTTTAC GAGAAAAGTT GGTGTAATGA TGAGATAAAG GAACTTGAAT TCTGA 
Length975
Protein Sequence
Protein Residue
Map Locationscaffold_6: 20078207.. 20079250
Download Sequence
A.thaliana
AGI-codeAT4G11580.1
DescriptionRNI-like superfamily protein
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
2.82843 Ahg475442
10.2956 Ahg913344 TRAF-like family protein
16.3707 Ahg949764
16.7332 Ahg891726 Pectin lyase-like superfamily protein
20.0998 Ahg917562 Ribosomal protein S5 domain 2-like superfamily protein
23.1517 Ahg481106 Protein of unknown function, DUF617
24.1247 Ahg337771
33.4963 Ahg470551 Protein of unknown function (DUF1264)
40.025 Ahg484068 Homeodomain-like superfamily protein
52.4786 Ahg476497 GDSL-like Lipase/Acylhydrolase superfamily protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression