Detail


ID : Ahg352254

Blast(Query):  A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|352254|fgenesh1_pg.C_scaffold_6002847
Sequence
ATGGCGGCAA AATCCCAGAA AACCCTCATT CTACTAGCAA ATCTAATCAA GGTTCCTCCA TTAAAAGCTT TCTCTCTCTT AAATTCTCCA AATTTCCATG GATTTCAACA CACACACGAA TCCATATCAA TCCTTCTTCG TCTCCTTCTC TCTGGAAACT TATACTCTCA CGCTCAATCA CTTCTCCTTC AAGTAATCTC CGGAAAAATC CAATCCCAAT TCTTCACATC TTCCTCTCTG CTACACTATT TGACAGAATC AGAAACGTCA AAAACCAAGT CTCGTCTCTA CGAAGTAATC ATCAATGCCT ATGTTCAATC TCAATCCCTA GATTCATCAA TCTATTACTT CAACGAAATG GTCGATAAGG GTTTTGTTCC TGGATCGAAT TGCTTCAACA ATCTCTTAAC TTTCGTTGTT GGGTCTTCTT CTTTCAATCA ATGGTGGTGT TTCTTCAACG AGAGCAAAAT CAAAGTTGTT TTGGATGTGT ATAGCTTTGG GATTGTGATC AAAGGTTGTT GTGAAGCTGG TGAGATTGAG AAAAGTTTTG ATCTTCTTGT TGAATTAAGA GAGTTTGGGT TTTCTCCAAA CGTTGTTATC TACACTACTT TGATTGATGG GTGTTGCAAG AAAGGTGAGA TTGAGAAGGC GAAAGATTTG TTTTTTGAGA TGGGGAAGTT CGGATTAGTG GCTAATGAGT GGACTTACAC GGTTTTGATT CATGGGTTAT TCAAAAATGG GATTAAGAAA CAAGGGTTTG AGATGTACGA GAAGATGCAG GAAGATGGTG TTTTCCCTAA TCTCCATACT TATAACTGTG TGATGAATCA GCTTTGTAAA GATGGAAGAA CAAAAGATGC GTTTAAAGTG TTCGACGAAA TGCGTGAGAG AGGGGTTTCG TGTAATATTG TTACTTATAA TACTTTGATT GGTGGGTTAT GTAGAGAGAT GAAGGCGAAT GATGCAAATG AGGTTATGGA TCAGATGAAG AGTGATGGAA TCAATCCGAA TCTGATTACG TATAACACTT TGATTGATGG GTTTTGTGGT GTGAGAAAAT TGGGGAAGGC GTTGAGTTTA TGCAGAGATT TGAAGTCAAG AGGTCTGTCT CCGTCTCTTG TCACGTATAA TATTCTAGTT TCCGGGTTCT GTAAGAAAGG GGATACTTCA GGAGCAGGTA AGGTGGTTAA GGAGATGGAA GAGAGAGGGA TTAAACCGTC GAAAGTAACA TACACGATAC TTATCGACAC GTTTGCTCGT ACGGATAACA TGGAGAAAGC AATTCAGCTT CGATTATCAA TGGAGGAACT AGGATTAACC CCGGATGTTC ATACCTATAG CGTATTGATT CACGGGTTTT GCATCAAAGG TCGAATGAAT GAAGCATCGA GGCTTTTTAA GTCGATGGTC GAAAAGAAGT TTGAACCAAA CGAGGTGATA TACAATACAA TGGTTCTCGG GTATTGCAAG GAAGGTAGTT CTTATAGAGC ATTGAGGTTG TTCAGGGAGA TGGAAGAGAA AGAGTTGCCT CCAAATGTTG CTAGCTATAG GTATATGATT GAAGTTCTTT GTAAAGAACG AAAATCGAAA GAAGCTGAGG GTTTGGTTGA GAAGATGATT GATTCAGGGA TTGGTCCATC TGATTCAATC CTTAATTTGA TCTCTAGAGC TAAAAATGAT TCACATTCTA GATCCATGGA CGAGGAGGAG CCAGCTTCCA TGGTGTTTGA TGGTTTGATG GTTTGTGAGC TCTGA
Length1755
Protein Sequence
Protein Residue
Map Locationscaffold_6: 20252432.. 20254248
Download Sequence
A.thaliana
AGI-codeAT4G11690.1
DescriptionPentatricopeptide repeat (PPR-like) superfamily protein
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
8.30662 Ahg912289 paired amphipathic helix repeat-containing protein
16.6132 Ahg481672
38.9102 Ahg485555 basic leucine zipper 24
59.127 Ahg896432
61.0246 Ahg492783 Tetratricopeptide repeat (TPR)-like superfamily protein
62.0645 Ahg894730 transposable element gene
67.1863 Ahg930806 Tetratricopeptide repeat (TPR)-like superfamily protein
68.4105 Ahg496683
70.5904 Ahg345468
71.4983 Ahg489984 serine racemase
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression