Detail



ID : Ahg912289

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|912289|Al_scaffold_0001_2543
Sequence
ATGGTTGGAA GAAGCTTATC ACCGGCGTTT ACTCTTGATG ATGCGAGGTC ATTTGTCAAT GATGTGAAGG AAGCATTTGG TGCTGATGAA ACTGCAAAAT ATCGAGAGTT TCTCGACATC CTGCAGGGTT TAAGAGCTAA TAGAATCGAT TATCCTACTC TCGTTGCAAC GGTGGAGGAA CTCCTGAAAG ATCATCAGGA TCTGCTTCTT CGTTTCAATG CCTTCTTTGC AGTTGAGCCT AAAGATAGTA AAGGAAGAGT CTGTGAAAGG GTAAAGAGAG TCCTGAAAGG CCACCCGAAT CTGCTTCGTG GTTTCAGGGT CTTCGTTCCA GCTAGGTCTA CGATAACCAT CGCTTCGACA AAATCTGAGC AACGGGCTGC GTCTGACAAT AACAAAAGAA TACGTGTAGC AAATTTCATC ACCAAGCTTA AGGCAAGGTT CCAGGGGAAT GATCGTCATG TATATGAGTC ATTTCTCGAG ATATTGACAA TGTACCAAGA AGGAAACAAG TCCGTGAATG ACTTGTACCA GGAGGTGATT GCACTTCTTC AGGGTCATGA AGATTTAGTC ATGGAGTTTG AAGACGAGTC AGGACAATTA GGGTTTACGA TCGAGTTCTT GGGTTTAGCT TCTTCACAGA TTCAAACCAT GATTGAAAGA AGAGTATCAC CGGAACCTAC TATGGATGAT GCAGTTTCAT TCATTGATTC TGTGAAGGAA GCATTTCACG ATGAACCTGC AAAATTTCAC GAGTTTAAAG CGCTCCTGAA TGATGTTCGA GATCATAGAG TTGATAACGC TAGTGTCATT GCAAGAATGA ATGAACTCAT TAGAGGGTAC CCGAAGCTGC TTCGTGGTTC AAGAGTCTTC TTGCCCGAGG CTGAGATAAC CATCCCTCCC AAGGCTGAGC AACGCCCTGA GTCTGATGGT GATCAAAAGA AATGTGCTGA TGTAGAGAAT CATATGAACA AGCTTGAGAC AAGGCTTGAT ACTCTTGTAT TTCCGACAAT GACTGAAAAG ACTTATGAGG GAAGGAAGTC GATAAAGGAG CTGCACGAGG AGGTAGTCTT TTTATCCGAG GATAAGATAA CCATCCCACC CAAGGCTGAT AGAACCATCC CCTCCGAGGC TAACAAAACC ATTCCTCCTG AGGCGAACAA AGGGTTAAGC CAATTTCAAA CCATGGTTGG AAAAAGTGTA CCACCAAAGA AAACTATCAA TGATGCATGT TCATACATCT ACTCCGTGAA GGAAGCATTT CATGATGAAC CTGCAAAATA TGCCGAGTTT CTCAAGCTCT TGGATGCTTA TAGAGCCCGT AGAGTCGATA AAGACAGTGT CATTGCAAGG TTGGAGGAAC TCACGAAAGA TCACCGGGAT CTGCTTCTTG GTTTAAGTGC CTTCCTGCCT GCGGCTACAA AAACAAATCC TCACAAGGCT GATGAGCTAA CCAGCCTTCC TGAGGCTAAC AGAGCCACCC CTCCCAAGGC TAGCAGAACC ATCCCTCTGA AGTTTAAGAT AACCATTCCA CCAAAGGCTA GAAGAACCAT CCCTTCTGAG GCTGAGAAAC CTACACACTC TGATGAATTG AATTTTATAA ACAAGCTTAA GACAAGGTTT CAGAGAATTG ATAATCATGT AGTTGGGTCA TTTCGCTTGA TAATGAAAAT GTATGAAGAA GGAAAGAAGT CAGTAAAGGA GGTGCACGAG GAGGTCTATG ATCTTCTCTA TTACCATGAA GATCTGATTG AGGACTTCTC CAGAATCTTT CCTGATCCTT TCGCATCAAC ATCTCTACTA AGATCTCCAG TAATCGGAAG AAGAGTATCA TTGAAGCTAA CTATGGATGC TGATCGTTTA AATATCGCTT CTACGGAGAA AGCATTTCAT GAAAGAGAAC GAACAACTAT GCGTGAAACG GTTACATACA TCGCTCATGT GAAGGAAGCA TTTCTTGATG AACCTGCAAA GTTTGACGAG TTTCTCAAGC TCATGAAAGA TGTTTGTGAT CATAAAATCG ATGAAGCTAA TGGCAGTGCA ATGATGGCTG AAATCATTAA AGGGCACCCA AATCTGCTTC TTCGTTTAGG TGTCTTCTTT CCCAAGTATT CTGTGAACAA GCATAAGGGT AAGAGAACCA TCCCTCCAGA TGATGAGCAT GGTGGTAGTG CTGAGTCTAG TAATAACAAA AAAAACCGTG CTGCCAATTT TATGGAGAAT CTTGAGGCAA GGTTTCAGGG TGATGGTGGT CATGTAGTTA ACTCAGTTCT CCAGATAATT AGGATGTACA CTATTGAGGG AAACAAGTCC AAAAATGAGG CGTATCATGA GGTAGGGTTC TTGGTCGTTG CACTTCTTCA GGGTCATGTA GATTTAATCA TGGAGTTTGG CGAATATTTT AGTGATAAAT TGTCTCAGCC TAAATATGCT TGA 
Length2433
Protein Sequence
Protein Residue
Map Locationscaffold_1: 10225391.. 10231434
Download Sequence
A.thaliana
AGI-codeAT1G24220.1
Descriptionpaired amphipathic helix repeat-containing protein
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
8.30662 Ahg352254 Pentatricopeptide repeat (PPR-like) superfamily protein
32.249 Ahg487536 Protein kinase superfamily protein
45.9021 Ahg939991 Amino acid permease family protein
46.2601 Ahg942039 basic leucine zipper 9
51.8652 Ahg479013 DNA photolyase family protein
76.6355 Ahg497233 Protein kinase superfamily protein
76.6355 Ahg496146 Protein kinase superfamily protein
96.933 Ahg478246 DHHC-type zinc finger family protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression