Detail


ID : Ahg353036

Blast(Query):  A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|353036|fgenesh1_pg.C_scaffold_7000209
Sequence
ATGGTTTTGC AGAAGAAGAT AGCTTCGTTA ATTATTTGTT TCCTTCTGTT GCTTCTTCTT CCACTCTCCT TTTCTAAGCC GACAAGAAAC TTAGATGGAA TAAGTGCAAG AGCTCCAACA GTGCAGCAGA TAAGAAACAG ACATCATGGG ACTAGAGAGG TGATAGTGGA CAATGGGATT ATCAGAGTCA GTTTCTCGAA TCCTCAAGGA CTTGTAACTG GGATCAAATA CAAAGGAATT GATAATGTTC TTCATCCACA TCTCCGAGCT CGAGGGTACT GGGACATAAC ATGGCAAGGA ACAAACATTC GTCAGGGCGG CTTAGATCGA ATCGAAGGAA CCAAATTTAG AATCATCACT CAAACCCAAG AACAAGTGGA GATATCGTTC TCTAGAACAT GGGAGGATGG TCATATTCCA TTAAACGTAG ACAAGAGGTA TATTATACGT AGAAATACTT CAGGAATCTA CATGTACGGA ATCTTCGAGA GACTTCCCGA ATGGCCAGAA CTCGACATGG GTTTAATCCG AATCGCTTTC AAACTCAACC CTGACAGATT TCATTACATG GCGGTGGCGG ATAATCGACA AAGAGAAATG CCAACGGAAG ATGACCGTGA CATCGAACGT GGTCATGCCA AGGTTCTTGG TTATAAAGAG GCTGTACAAT TGACTCATCC TCATAACTCC ATGTTCAAAA ACCAGGTGGA TGATAAGTAC CAGTACACAT GTGAGATCAA AGACAACAAA GTGCACGGTT GGATCTCAAC TAAGTCCCGT GTCGGCTTTT GGATCATCTC ACCAAGCGGT GAATATCGCT CTGGTGGACC AATCAAACAG GAGCTCACGT CTCACGTCGG TCCCACGGCC ATCACGACTT TTATAAGTGG ACATTATGTT GGTGCGGACA TGGAGGCACA TTACCGACCT GGTGAAGCAT GGAAAAAGGT CTTGGGACCT GTTTTTATTT ACTTAAACTC TGATTCTACC GGCAACAATC CTCCTCAAGA TTTGTTATGG GAAGATGCTA AACAACAGAC CGAAAAAGAA GTCAAAGCAT GGCCGTACGA ATTTGTAGCA TCCTCTGACT TTCTTTCTCG TCGAGAAAGA GGAATCGTCA CCGGTCGTCT CTTAGTCAAC GACAGATTCT TGACGCCGGG AAAATCTGCT TATGTCGGTT TAGCACCGCC GGGAGAAGCT GGTTCGTGGC AGACAAATAC TAAGGGATAT CAGTTTTGGA CCAAGACAAA CGAAACCGGT TATTTCACGA TAGAAAACGT TAGACCGGGA ACTTACAATC TGTATGGGTG GGTTCCTGGT TTTATCGGAG ACTTTCGATA CCAAAACCGT GTTAACGTAG CTGCAGGTTC ACATATTACT CTTGGTAGAG TCGTGTACCA GCCACCTAGG AATGGTCCAA CGCTATGGGA GATTGGTGTA CCGGATCGAA CCGCCCAAGA ATACTTTATA CCGGAGCCAT ACAAGAATAC AATGAATCCT TACCTAAACC ACACTGACAA GTTTAGACAG TACGGATTGT GGCAACGATA CACAGAGTTA TATCCAACTC ATGATCTCGT CTACACAGTT GGAGCTAGTA ACTATAGCCA AGACTGGTTC TACGCCCAAG TCACAAGGAA AACCGGTGAT TTAACGTACG TGCCAACAAC ATGGCAGATC GTGTTTCACC TTCCATACGT AAACTGGCAA GGCGGCTACA CATTGCAGCT AGCTTTAGCC TCGGCTGCAC GGGCTAATCT ACAAGTTCGG ATCAATACCC AAAACTCTTG GCCGTTTTTC TCAACGGGTA ATATTGGAAA AGACAATGCT ATAGCAAGAC ATGGAATCCA TGGAATGTAC CGGCTTTATA GCATCAATGT GCCTGGAAGG TTGCTAAGAA CCGGGACCAA CACGATTTAT CTTCGACAGG CTAAAGCAAC AGGACCATTT GAAGGTCTTA TGTATGATTA CATTCGTCTA GAAGAGCCTT CTAGAGATTA G
Length2001
Protein Sequence
Protein Residue
Map Locationscaffold_7: 912698.. 916952
Download Sequence
A.thaliana
AGI-codeAT4G38030.1
DescriptionRhamnogalacturonate lyase family protein
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
28.6356 Ahg917658 subtilase 4.13
29.3939 Ahg909166 BEL1-like homeodomain 11
34.4964 Ahg477911 NOD26-like intrinsic protein 7;1
38.0657 Ahg336658
48.9898 Ahg488975 Leucine-rich repeat protein kinase family protein
50.319 Ahg323952 RNI-like superfamily protein
51.9615 Ahg359781
54.0833 Ahg473604 FAD-binding Berberine family protein
58.3267 Ahg496065 actin 4
63.6239 Ahg936695 plastocyanin-like domain-containing protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression