Detail



ID : Ahg496065

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|496065|fgenesh2_kg.8__1881__AT5G59370.1
Sequence
AGGATTTAGC AGAGACTAAC GGCCACGATT TGTTTAGAGT CAAGCGATAT AAAGCAAAGC TCCTTTCATT TTTTCAGAAA TTTTGAACCC ATTAATTCAA GGCGGGGCGT TTCAGGATCC GATTTCAAGT TTTGTTCTTC GTTAAAATTC ACCAGACTGA AGAATGGCTG ACGGTGAAGA CATTCAACCG CTAGTTTGTG ACAATGGAAC GGGAATGGTT AAGGCTGGAT TCGCGGGTGA CGATGCGCCA AGAGCGGTTT TTCCAAGCAT TGTAGGCCGT CCTCGCCACA CGGGTGTGAT GGTTGGGATG GGACAAAAGG ATGCTTATGT TGGAGACGAG GCTCAATCAA AACGTGGTAT TTTGACTCTC AAATACCCAA TTGAGCATGG AATTGTTAAT AATTGGGACG ACATGGAGAA GATTTGGCAT CACACTTTCT ACAATGAGCT TCGTGTGGCA CCTGAGGAGC ACCCGGTTCT CTTAACCGAA GCTCCTCTCA ATCCGAAAGC TAACCGTGAG AAGATGACTC AAATCATGTT TGAGACATTT AACACTCCTG CTATGTATGT TGCCATTCAA GCTGTTCTCT CACTCTATGC CAGTGGCCGT ACAACTGGTA TTGTTTTGGA CTCTGGAGAT GGTGTGAGCC ACACGGTACC AATCTACGAG GGTTACGCTC TTCCACACGC GATCCTACGT CTTGACCTAG CGGGTCGTGA CCTCACAGAC CACCTCATGA AAATCCTGAC AGAACGTGGC TACTCCTTCA CCACAACTGC TGAGCGTGAA ATTGTAAGAG ACATGAAAGA GAAGCTCTCT TATATTGCTC TAGACTACGA GCAAGAGCTA GAGACTTCCA AAACAAGCTC GTCCGTTGAG AAAAGCTTCG AGCTTCCTGA CGGACAAGTG ATAACCATTG GAGCAGAGCG GTTTCGGTGT CCGGAAGTTC TGTTTCAGCC GTCAATGATC GGAATGGAAA ATCCGGGAAT CCATGAAACC ACATATAACT CTATCATGAA ATGTGATGTG GATATTAGGA AAGATTTGTA TGGTAACATT GTGCTAAGTG GTGGAACCAC AATGTTTGGA GGGATTGGTG ATAGAATGAG CAAAGAAATT ACGGCTTTGG CTCCAAGTAG TATGAAGATT AAGGTCGTGG CTCCACCGGA GAGGAAGTAC AGTGTTTGGA TCGGTGGCTC TATATTAGCT TCACTCAGCA CTTTCCAGCA GATGTGGATT GCGAAAGCAG AGTACGATGA ATCTGGACCC TCAATTGTGC ATAGGAAATG CTTCTAATCA CAGTTCCTAA AATCACCAAA GGAAGACAGA AGTAAAAGTA AAAGACAACA TTTTTCCATC ATATTTTCTA ATGTCTCCAT TTTTTTTTTT TTTTTTTTAA TAGTCTCTCT ATGTTAATTT TTCCAACTAA GCATACTTTT CTTTGAAGAA TGTCCACTCC CA 
Length1462
Protein Sequence
Protein Residue
Map Locationscaffold_8: 17930103.. 17932281
Download Sequence
A.thaliana
AGI-codeAT5G59370.1
Descriptionactin 4
TAIR curator summaryEncodes one of eight Arabidopsis actins. ACT4 belongs to the reproductive actin subclass which is predominantly expressed in developing and reproductive tissues, such as pollen, pollen tubes, ovules, and developing seeds. Expression of the ACT4/GUS fusion was restricted to young vascular tissues, tapetum, and developing and mature pollen.
Alias[ACT4][actin 4]
Gene coexpression
MR
MR Locus Description
2 Virus2873
5.65685 Virus0595
6.245 Virus3286
24 Ahg485023 actin-12
24.7386 Virus0932
58.3267 Ahg353036 Rhamnogalacturonate lyase family protein
77.1427 Ahg328231 O-methyltransferase family protein
87.1608 Virus0632
94.8999 Virus2985
96.7781 Ahg907360 SCR-like 5
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression