Detail


ID : Ahg353815

Blast(Query):  A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|353815|fgenesh1_pg.C_scaffold_7000988
Sequence
ATGATATGCG AAGATGCATA TCAGTATCAG CAATTACATG GACAAAAGGA TCACATGATG ACAATGATGA TGATGGACTT GAGCACATCA CCACCCTCAT CACCCATTTC ACCATCTTCA CCATCATACA ATAACAACGA GGAAGATAGA CTTGAGGTTG TGAATTTGAG TGGCATGGCA TTGCAATCTC TCCCAAATCC TTCCCTCAAT TTGGCAAATA TTTGCAAGCT TGATCTCTCC AACAATCATA TCAAGAAAAT ACCAGAATCT CTAACAGCGA GATTACTCAA CTTGATAGCA TTAGATATTC ACTCTAACCA GATCAAAGCT CTTCCAAACT CCATTGGTTG TCTCTCTAAG CTCAAGATCC TTAATGTCTC CGGCAACTTT CTCGTTTCCC TCCCCCAAAC TATTCAAAAT TGCAGGTCAC TCGAAGAACT AAACGCCAAC TTCAACGAGC TGATTAGATT ACCAGACAAC ATAGGCTTAG AACTAACCAA TCTGAGGAAG CTCTGTGTCA ACTCAAACAA GCTCATTAGC CTACCAACCA CCATCACCTA CCTCACTTCC CTACGTGTCC TCGATGCTCG TCTCAATTGC CTTATGATCC TCCCGGAGGA CCTCGAGAAC CTCATCAACC TCGAGATCCT CAATGTCAGT CAGAACTTCC AGTATCTTTC TGCTCTTCCA TCTTCTATCG GTCTTCTCCT GAACCTCCTC GAGCTGGATA TTAGCTACAA CAAGATAACA GTGTTGCCTG AGTCCATTGG ATGCATGAGG CGGCTGAGGA AACTGAGCGC AGAGGGAAAC CCACTCGTGT CCCCACCCAT TGAGGTTGTG GAGCAGAGCT TGCAGGCAGT GAGAGAGTAT CTAAGCCAAA AGATGAATGG TAAACTGGTG AACAGCGCGG CAAAGAAGAA GACATGGGGT TTCCGTAAAC TGGTCAAGTA TGGGACATTC AATGGCAGAT CAAGAGCTTG GACCAGAGAA GAGAGAGAAG GTCTCATCAT GCCCGAGTAC CGTCCCATTG ATATCCTAAC TTCGACCAAG TTTCCTGTAA TGTGCTCACC TCGGCGTCTC TTCTCCCCAA GAACCTATTT CAGCAGATAA
Length1110
Protein Sequence
Protein Residue
Map Locationscaffold_7: 4773210.. 4774521
Download Sequence
A.thaliana
AGI-codeAT4G29880.1
Descriptionplant intracellular ras group-related LRR 7
TAIR curator summaryEncodes PIRL7, a member of the Plant Intracellular Ras-group-related LRRs (Leucine rich repeat proteins). PIRLs are a distinct, plant-specific class of intracellular LRRs that likely mediate protein interactions, possibly in the context of signal transduction.
Alias[PIRL7][plant intracellular ras group-related LRR 7]
Gene coexpression
MR
MR Locus Description
22.3607 Ahg486413 pfkB-like carbohydrate kinase family protein
29.8998 Ahg891276
32.6343 Ahg337343
34.8712 Ahg472490 RING/U-box superfamily protein
36.1939 Ahg926309 Protein of unknown function (DUF1163)
47.2864 Ahg926138
54.6626 Ahg496092 Homeodomain-like superfamily protein
55.5878 Ahg344079
65.521 Ahg495065 ethylene response factor 110
67.6609 Ahg348185
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression