Detail



ID : Ahg472490

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|472490|fgenesh2_kg.1__2444__AT1G22500.1
Sequence
TATTTTATAA AGCTCTTTCA CCGGCAAATT GGTCCTCATG AAACCGGGAA GTCCAACAAC TTACCTCCAC CGTCAAATCG TTAAACCATT TGCAACCATC GATGGTGGTC ATGTCACGTT TAAGCTTCTA CTCTTCCTTC GTCCTACTAC TGTTACAGCT CGCTGTCGCT CAAACCGAGT TTGCTAATGA TGGAGGAAGG ACAAATATCA GTCCAAGCAT GGTTATACTC ATGATCGTAC TCGTTAGTGT TTTTTTCGGA ATTGGATGTA TCTCCGTCTC CATGCGGAGT TGTATCGAGC GAGCTACAGG GTTGGGCGGC TATAGTCGCC AAGGAAACTG GCGTAACGTG AGGCAAACGA CGGCGCGTGG GCTCGACGCG TCTGTTATAG AAACGTTTCC AACGTTTCGT TACTCTACCG TGAAGACGTT GAGGATCGGC AAAGAAGCTT TGGAGTGTCC CGTTTGCCTC AACGAGTTCG AGGACGACGA ATCGCTGCGT TTGATTCCTC AGTGTTGTCA TGTGTTTCAT CCTGGTTGCA TTGAGGCTTG GCTCCGTTCT CAAACAACAT GTCCTCTTTG CCGTGCCAAT CTAGTTCCTG TACCAGGTGA ATCTGTTTCT TTGGAGATAC CCGGTTTAGC TAGAGAAACC GGTCAGAGCT CTCTCGGGAC GCCGATTGAT GATAACGGGA AAAGGGTTTT GGCTTCACCG GACGAGCGGT TGATTGACTC TGTGGCTTGG ACGGGTAACC AAAGCATGCC ACGTAAGTCC ATGTCTACAG GTTGGAAACT AGCTGGATTG TTCAGCCCGA CTAGTTCTCC CGGTCAACCA GAGGAGAATC TCGACCGGTT TACACTGAGG TTTCCACAAG AGATACACGA TCAGCTCGTG AAATCCAGCC GAGGAAACCA AGGGTCAAAA GACCATGTGG CGTTACCTCA AGCAAGGAGC TCGGTTAGAG GGTACAGAAC CAAAAGCCTA GGGACTGAAA AGAACTATTT CTACTCTGAA CGGTTTGATC AAGACGGTCG ATTAGACCGA AGACCATTTT CTATAACTCC TCCGTACCAT ACCCGGTCGA TCCAGTCTCC GGATGAGATT ATCAACGGTA GCGGTAATTA TCAGGAGCGT CCTGGTGCAC CTAAAGGTTT GCTTCTAGCG ATAAGGTCAC CCTTTGATCG GTTATTCACC AAGAAGAACA ATGTCGGTGA ACGTTCGTAC CTGCGATCCA GCGATGCCAG CCCTGCCTAG GTAATAAAGG AATGGACCAT TTTGTTTTAT CATCC 
Length1285
Protein Sequence
Protein Residue
Map Locationscaffold_1: 9448362.. 9453199
Download Sequence
A.thaliana
AGI-codeAT1G22500.1
DescriptionRING/U-box superfamily protein
TAIR curator summary
Alias[AtATL15][ATL15][Arabidopsis thaliana Arabidopsis toxicos en levadura 15][Arabidopsis toxicos en levadura 15]
Gene coexpression
MR
MR Locus Description
34.8712 Ahg353815 plant intracellular ras group-related LRR 7
37.2961 Ahg950261
41.821 Ahg938977 jacalin lectin family protein
56.745 Ahg492890 Glycosyl hydrolase family protein with chitinase insertion domain
69.9142 Ahg929716 clast3-related
70 Ahg903319 Defensin-like (DEFL) family protein
89.7218 Ahg931258 RING/U-box superfamily protein
91.7388 Ahg320698 Concanavalin A-like lectin protein kinase family protein
99.8799 Ahg487548 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression