Detail


ID : Ahg487746

Blast(Query):  A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|487746|fgenesh2_kg.6__880__AT5G09350.1
Sequence
TGAATGGCCA TCAAAAGCCT CCGACAATGG CGGAGACGAC GGCGATTGAA CTCAGCTACT TTCAACTCCG CATTTGAATT TTCTCAAGCT TGCAACTTTT ATTGACAACG AATAATGGGT TTGCTTTGAA GAAGCTGATC ACTGGCTTCT AGAACTCTTA TTCTTCTCCC TGAGATTATC TCGTCTCGGG GAAAATTTTC CGTCATTACC GGTTTTTATT AACTAGGAGA CGAGGAATAT CTTGGTCTGT GCTTCGACAT TAGGAGAAGC TGTGGTTCGT GGCATTGTGA AGTCCGAATT ATTCGAATTT TGATTTTTAG TATATGAGAT TTGGGTTTTT AGCGACAATA AGGTTTAGTG TAAGGTTATG TTTTTGATCT GGTCTGGATT CGGTAGAGAA ACTACCCGAT CTACTACTTC TTTGATTCGG ATGATTTGAG TCTGCGAGCT AGAATCTCTT ATTACAAGGC TGATCATCAA AAATGCAGAT GGCACAGTTT CTTTCACTGG TTCGAGGTGA TTCGATTGAG TCTCCTCGTG AGATTACCTC GCCCGGTAGC CTCATCAGCG AGTCCGGTTC GAATGGGTGG CTTATCCGCT TTTTTGATTC TTCCTTCTTC TGTGAGTGGA TTGCAGTCAG TTATTTGTAC AAGCACCAGC ATTCGGGTGT GAGAGATTAC TTATGCAATA GGATGTATAC GCTTCCTTTA TCCGGTATCG AGAGTTATCT GTTCCAGATT TGCTACTTGA TGGTGCACAA ACCAAGTCCC TCACTTGATA AGTTTGTGAT AGATATTTGT GCAAAGTCAC TTAAGATAGC ACTGAAAGTG CATTGGTTTT TGTTGACGGA ACTTGAGGAT TCTGATGATA ATGAAGGTAT CAGCAGGATT CAAGAGAAGT GCCAAATTGC AGCTACTTTG GTGGGTGAGT GGTCGCCTCT TATGCGGCCA CAGAACGAAC CTTCAACTTC AGGGAGCAAG AATCCGGTTC TTAATAAGTT TTTCTCATCA AAACAGAAGT TCTTCTCATT GAATTTATCT CCATCCACCC AGAAGTCTTT ACTATCCTCA CCTACAACAG GGAGCAACTT GCAGGATGAT TGTAGTCAGT TATCTGCGGA CGACAATAAG ATTTTTCAGA GACTAATCCC AAGTCCTAAA GTTAGAGATG CTTTATTGTT TAGGAAGTCA GCTGACAAAG AAGACGAGGA ATGTGAAAAG GACGGATTTT TCAAGAGACT CTTGAGGGAC AGCAGATGTG AGGATGATGA ACAAATGTCA AACTCAGAGG GTTTCTTTAA GCGACTATTG AAAGACAATA AATCAGAAGA GGAAGAGATA TCAAACAATT TCGAGGGTTT CTTCAAGAGG CTACGGAGTA GTAAAGGAGA TGAAGAGGAA TTGACATCGA GTTCAGATGG ATTCTTTAAG AGATTGTTAC GAGATAATAA AGGAGATGAA GATGAATTGG GTGCCAACTC CGAGAGTTTC TTCAAGAAGT TATTGCGGGA TAATAAAAAC GAAGACGAGG AGCCAAATGC ACACACAGAA GGGTTCTTCA AGAAACTATT CCGTGAGAGC AAGAATGAGG ATGAAAAACT TTCTAACGCA GTAGATGATG AGGAAAAAGA TGGGTTTTTT AAGAAATTGT TCAAAGAAAA GTTTGATGAG AAAAGAAATG GTAACGAGAA AAATGAGACA GATGAAACCA TGTATACTGA CGGAAAACCT GGTGAAGATA ATGAACGGGA GGGATTTTTC AAAAAATTCT TTAAGGAGAA GTTTGAAGAC AAACAAGACA TTGGCAAAGC CGATGATGGG AATGAAAGCG AGGATGACGA ATCTTCAGAA TTCTCACTGT TCAAAAGATT GTTCCGTAGA CATCCAGAAG ACGTGAAAAC TACTTTACCA AGTGAAAACA GCAGCAATGG CGGTTTAGTT GAAAGCAGTC CTGGGACAGA AAACTTTTTC AGCAAATTGT TCAGAGATCA TGACCGGTCT GTTGAAGATT CTGAACTTTT CGGTTCGAAG AAATATAAGG AGAAGTGTCC AGGTTCACCT AAACCACAGA ATGATACTCC ATCTAAAAAG CCCCCACTAC CAAACAATAC TGCAGCACAG TTCAGGAAAG GGTCTTACCA CGAGTCTTTG GAGTTTGTAC ATGCATTATG TGAAACGTCG TATGATTTGG TAGATATTTT TCCCATTGAA GATCGGAAGA CCGCTCTTCG TGAGTCTATT GCAGAAATCA ATTCCCATTT AGCTGAGGCT GAAACTACTG GAGGAATCTG TTTTCCAATG GGCAGAGGAG TTTATCGTGT TGTTAATATT CCTGAAGACG AGTATGTTCT TTTAAATTCT AGGGAAAAGG TGCCTTATAT GATATGTGTG GAAGTTTTGA AAGCAGAAAC ACCCAGTGGT GCTAAAACCG CATCTACTTC CCTTAAGCTT TCTAAAGGAG GCATTCCATT GGCAAACGGG GATGCATTCT TGCAAAAGCC ACCTCCATGG GCTTATCCGC TATCTACTGC TCAGGAGGTT TACCGTAACA GTGCAGACCG AATGTCATTA TCAACTGTTG AAGCAATTGA TCAAGCAATG ACCCATAAGT ATGAGGTAAA ACTTGTGAAT GCAAGTCTCT CGGTCGAGAA GCATAGTAAT TCCATTACCA AATCAGTAAG CAGTGGTGTG ACTGGTGTCC TGAGGACTGG TTTGGAAAGT GATCTTGAGT GGGTTAGGGT GGTGCTGACC GCTGATCCAG GTCTTAGAAT GGAAAGCATT GCTGATCCGA GAACCCCACG TCGAAAGGAA CATCGTCGTG TTCCAAGTAT AGTTGCCTAC GAGGAAGTAA GGGCTGCTGC AGCGAAGGGA GAGGCACCTC CAGGTCTTCC TCTCAAAGGG GCTGGTCAGG ATTCATCAGA TGCACAGCCA ATGGCCAATG GTGGAATGCT GAAAGCAGGT GATCCCTTAT CTGGTGAATT TTGGGAGGGG AAGCAACTAA GAATTCGTAA AGATTCAATA TATGGCAACC TACCAGGTTG GGACTTGCGC TCTATCATTG TGAAAAGCGG TGATGACTGT CGGCAGGAAC ATCTTGCGGT TCAACTCATA TCTCACTTTT TTGATATATT CCAGGAAGCA GGGCTTCCCC TCTGGTTACG TCCTTATGAA GTCTTGGTGA CATCTTCATA CACTGCCCTT ATAGAAACAA TTCCAGATAC GGCTTCTATT CATTCTATTA AAAGCAGATA CCCTTACATC ACAAGCCTGC GTGATTTTTT TGATGCTAAG TTTAAGGAGA ACTCCCCAAG TTTTAAGCTT GCTCAGAGGA ATTTTGTTGA GAGCATGGCT GGATATTCTT TGGTCTGTTA CCTTCTGCAG ATAAAAGACC GTCATAACGG AAACCTTCTG ATGGATGAAG AAGGTCACAT TATACACATT GATTTCGGCT TTATGCTTTC AAATTCTCCT GGTGGCGTGA ACTTTGAGAG TGCCCCATTT AAGCTAACTC GGGAACTTCT TGAGGTCATG GATTCTGATG CTGAGGGGGT TCCAAGCGAG TTCTTTGACT ATTTCAAGGT GCTATGCATC CAAGGATTCC TAACATGTAG AAAGCATGCT GAACGGATTA TTCTTCTCGT CGAAATGTTA CAGGATTCAG GTTTTCCTTG CTTCAAAGGT GGTCCACGCA CCATTCAGAA TCTAAGAAAA AGGTTCCATC TAAGTTTAAC CGAAGAGCAA TGCGTCTCTT TGGTACTCTC TCTAATCAGC AGCAGCTTAG ATGCTTGGCG AACTCGACAA TACGATTACT ACCAAAGGGT GTTGAATGGA ATACTATGAT GTTAATTTAC TTACAAAAGT TTGAGATCTC TTCAGTGAAT CAACCTGATG AGAGACTAAA CAGGTATACT ATGGTTGTGT TGTTCTCCAT GTCCATTGCA TGTGAAGAAC CTTCGAGCTT CAAAGAGCTC TTGAGGAAAT CAATTACACG AAGAGAAAGC GAGACATTGT GTGACCAAAA ACACTTTTGT ACATAGGATA GTTTCTTTTT TCAGGCAAAG CCAAAAGTTA ATTC
Length4074
Protein Sequence
Protein Residue
Map Locationscaffold_6: 3569462.. 3576547
Download Sequence
A.thaliana
AGI-codeAT5G09350.1
Descriptionphosphatidylinositol 4-OH kinase beta2
TAIR curator summaryEncodes a phosphatidylinositol 4-OH kinase, PI-4Kbeta2. Arabidopsis contains 12 PI-4Ks in three separate families: PI-4Kalphs, PI-4kbeta, and PI-4Kgamma. PI-4Kbeta2 is 83% identical to PI-4kbeta1 encoded by At5g64070. Important for polarized root hair growth as the loss of this gene and its close relative PI-4kbeta1, leads to the formation of abnormal root hairs.
Alias[PI-4KBETA2][PI4KBETA2][phosphatidylinositol 4-OH kinase beta2][PHOSPHATIDYLINOSITOL 4-OH KINASE BETA2]
Gene coexpression
MR
MR Locus Description
4.47214 Ahg492683 Pentatricopeptide repeat (PPR) superfamily protein
30.5941 Ahg494701 Leucine-rich repeat protein kinase family protein
31.7805 Ahg473836 beta-galactosidase 5
34.8568 Ahg478808 DZC (Disease resistance/zinc finger/chromosome condensation-like region) domain containing protein
35.6651 Ahg482381 MATE efflux family protein
36.4143 Ahg496765 homeobox protein 5
38.5746 Ahg354188 CCT motif family protein
39.0384 Ahg476993 RNA-binding (RRM/RBD/RNP motifs) family protein
40.2989 Ahg479182
42.7083 Ahg494887 Actin-binding FH2 (formin homology 2) family protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression