Detail



ID : Ahg354789

Blast(Query) A.halleri   /   A.thaliana (NOT RECIPROCAL)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|354789|fgenesh1_pg.C_scaffold_7001962
Sequence
ATGAATCGCG AAGGCCTGTA CGAGGTTGAC GATGATGATG ACGATGACGA CGATGATATC GGTGAAGATC TCGAAGAATT AAGACGAGCC TTTATCGTCA CTGAGGCCAA AGGGTTGCCG TCGGATTCAG AGAATGACGA AGAAGATGAT TTGGAGATGC TTCGGAGCAT TAAGAGTCAA TTAGCTTCGT CGACGACGAA TGTGGGTTTA TCAGTGCCCT CGGATTCGGA GAGTGAAAAC CATTTTGAAA TGCTTCGGAG CATTAAGAGC CAATTGGCAT TGTCGATGGA CGAAGACGAA GATGAAGATG GTGCATTTGA AACCCTTCGC GCTATTCGTA GACGATTCTT TGCTTATGAA AATTTCGATG TGGAAGGAAA TTTCATGAAT GATTCTTCAC CCGGGAAGAA GAAAAAGCAG GTACATGCCT CGGATAATGA ACCTTCAACC GAAATATTGA GTAGATCTAA TACTTGTGAA AGCTTTCCAG ATCACGGGAA ATCAGCTGTT ACAGAGCCAG ATTCAGAGAC TTCTATTGAG AAACTTGACC ATTTGGAGAC ATGCCAATCA TCTCTTATGC CAGCTACAAG TTCAGGTTTC CCTGAAGCTG CACTAGCCTT TCTTGATGCA ATCCGGAAGA ACAGGTTATA TCAGAAGTTT CTTCGAAGAC AATTGAGTGA AATCGAAGCA ACGATTGAGC AGAACGAGAA ACACAGGAAA AATGTTAAGA TAGTTAAAGA TTTTGAAGCT TCTTGCAAGA GAATTACTAA ACAGGCACTT TCTCGAGGGA AAGATCCTCG AGTCGAATTA ATCTCAACTC CAAAATCTAG GCCTGATTCT GGTAGCTCCG GGGGTAATGA TAAAAAGACA TCTTATTTGA CTATGGGTCC GCCGGAAAAT ACTTGTGTTG AAAATTATAG GATGGCACTA GAGAAATATC CAGTTTCCGT GGATCGCGCA AATTGGACTA CTGAGGAGAA GGAAAATCTT GCAAAAGGTC TAAAACAACA AGTTCAAGAC ACACTCATTC GTGAAGCTTT TGAACGGTCC AGTGACTTGG AAGGATCTAC AGATGGTATA AACACCATTC TTGAAGGGAT AAAAAGTCTT GAGATCACAC CAGAAATGAT TAGGCAGTTT CTTCCGAAAG TTAATTGGGA TCAATTGGAT ATCAAGAACC GTTCTGCTGC AGAATGTGAA GCCCGGTGGA TGAGCTCGGA TGATCCATTG ATTAACAACG GTCCATGGAC TGTAGCAGAA GACAATTACA TACGCTTATT TACCAAAAAC AAGGGTTTTA CAGACTGGCT TGACATTGCG GTATCACTGG GGACAAATAG GACCCCATTT CAATGTTTGG CTCGATATCA GAGAAGCTTG AATCCAGATA TATTGAGAAA AGAATGGACT GCAGAGGAAG ATGACCAACT CCGTGCCGCA GTAGACTTGT TTGGCGAGTC AGACTGGCAA TCTGTTGCAA ATGTATTACA AGGAAGAACT GGACCTCAGT GCTCTAATAG ATGGAAAAAG TCGCTTCACC CTAGCAGAAC AAGGAAACGA AACTGGAGCT CAGAGGAAGA CAAACGATTG AAAGTAGCTG TAACACTGTT TGGAACTAAA AACTGGCGTA AAATTGGTCA GTTTGTTCCT GGACGGACGG GTACTCAGTG TCTAGAGAGA TGGGGAAATT CTTTAGATCC CAAACTTAAA TTTGGGAAGT GGACCAAGGA AGAGGATGCA AAATTGAGAG AAGCAATGAA AGAACATGGA CATTGTTGGT CTAAAGTTGC TTCATATATG TCTTGTCGCA CTGACAGTCA GTGCGCGAGG AGATGGAAGA GCTTATATCC TCACCTAGCG CATCTTAGAC AAGAAGCTAG AAGGTTACAA AAAGAAGCTA CTATAGGTAA TTTTGTTGAC CGCGAATCAG AGCGTCCAGA TCTTGTCGTA GGCGATTTTT TGGCACTAGC TGAGATATCT CTTGAGCCAG AAGAACCTGT CCTGACGAAG AAACGAAAAC CAAGACATAC GAAGAAGGCA GATACAGAAT GCGAGAGTGA AGCAGTTTGT GCTGATACAG AGAGACAACC AAAGAAGCAG AGAAAAGGAT TAGAGAGATG CTCAGGAGAT GTATGTAGAA AAAAGAATGA GAAGACTGAA GACAATGTAA AGGAGAAGAA ACAAAGGCGA AAACGCACAA GTGTTGCAGG AACATCAAAT AACAGCTCTG TGACCACCAA CTGCCCTCAA GTAAAAATTG GTATCCAGAA GCTTAAGCCT AGGAGGAAAG TCTCTGCACT AGTTCCTATT GAGAACCTAG ATGCACAAAA TTAG 
Length2334
Protein Sequence
Protein Residue
Map Locationscaffold_7: 9439980.. 9443143
Download Sequence
A.thaliana
AGI-codeAT3G18100.1
Descriptionmyb domain protein 4r1
TAIR curator summaryMember of the R2R3 transcription factor gene family.
Alias[AtMYB4R1][MYB4R1][myb domain protein 4R1][myb domain protein 4r1]
Gene coexpression
MR
MR Locus Description
50.8527 Ahg476024 pentatricopeptide (PPR) repeat-containing protein
54.5252 Ahg351609 Protein of Unknown Function (DUF239)
71.638 Ahg334832 HCO3- transporter family
77.666 Ahg491868 RING/U-box superfamily protein
88.7412 Ahg920251
93.397 Ahg917681 XH/XS domain-containing protein
96.3535 Ahg950873
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression