Detail



ID : Ahg355993

Blast(Query) A.halleri   /   A.thaliana (NOT RECIPROCAL)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|355993|fgenesh1_pg.C_scaffold_7003166
Sequence
ATGGCCGATC CTACCGAATC CTGCGTCATG ACGATGGCGG TGACCACCAC GCCGGCGTCA GATTTAGCTC TCACAAATCT CGCATATTGT TCTCCGTCTG ATCTCCGTTG CTTCGCTGTT CCCGGAACGC CCGATCTCTT CCTAGCTAAC GTCGGAGAAA GTATTTCTGA TGGAAGTATT GCTCTGAATT CGATTCAACG ACGACATGCT AGAGTTTCTG CTGGTGACAT TGTTTCTGTA ACAAGATTTA TTCCTCCTGA AAGCTTTGAC TTGACTGTTC TGACAGTTGA CTTAGAATTT GTCAAAAAAG GGACTAAAAA TGAACAGATT GATGCTACTC TCCTCTCAAC TCAACTGAAG AAGAAATTCA CTAACCAGGT CTTGACAGTA GGTCAAAGAG TTACATTTGA GTATCATGGA ACTAACTACA TTTTTACGGT CAATCGAGCG GTTATAGTGG CTGATGATGA GAACCAAACT AATTGTATCG AAAGAGGGAT GATTTGTAAG GATACATATT TTGTGTTTGA AGCATCAAAT GCAAGTGGCA TAAAGATTAT CAACCAACGA GAATCTGTTA CAAGCAAGAT ATTTAAAGAA AAGGAGTTTA ACCTTCAATC CCTAGGTATA GGTGGTTTAG GTGCAGAGTT TGTTGCTATA TTTCGAAGAG CTTTTACTTC TCGTATACTT CCTCGCGATG TCGTGAACAG AATTGGGGCA AAGCACGTTA AAGGGATGCT TCTGTTTGGA CCTCCCGGTA CTGGCAAGAC CTTGATGGCA CGCCAAATTG GCAAAATGCT TAATGGAAAG GAGCCAAAGA TCGTTAATGG TCCTGAAGTG CTAAGCAAGT TCGTCGGCGA GACAGAAAAG AATGTAAGAG ATCTGTTTGC TGATGCTGAA AATGACCAGA GAACACTTGG TGATGCTAGT GAGCTACATA TCATTATTTT CGATGAAATT GATGCTATTT GTAAGTCAAG AGGGTCAACC AGGGATGGGA CAGGTGTCCA TGATGGTATT GTAAACCAGC TCTTGACAAA GATAGATGGT GTTGAGGCTT TGAACAATGT TTTACTAATT GGAATGACAA ATAGAAAAGA TATGCTTGAT GAAGCTCTTT TAAGGCCTGG AAGATTAGAG GTTCATATTG AAATTAGTCT TCCCGATGAA GTTGGACGTT TACAAATTCT TCAGATTCAT ACAAAGAAAA TGAAGGATAA TTCTTTTCTT TCTCCTGATG TCAATCTCCA AGAACTTGCT GCTAGGACAA AGAATTACAG TGGTGCTGAG CTTGAAGGTG TAGTAAAAAG TGCAACATCA TATGCTTTCA ATAGACAACT GAGCATGGAA GATCTAACAA AGCCAGTGGA TGAAGAAAAT ATTAAAATTA CTATGGATGA TTTTCTTCAA GCCCTACTCG AAGTTAAACC TGCATTTGGA GCCTCTTCAA AAGACCTTGA ACTCTGCAGA CCTAAGGGAT TTGTGGATTG TGGTTATCGG CAAAAGTACA TCTACGAAAG AGTCATGTTT CTTGTTGAGC AAGTTAAAGT CAACGAAATA AGTCCTCCAC TCACTTGCCT TCTTCATGGG TCTAGTGGAA GTGGAAAAAC TGCGTTAGCC GCGACCATTG GCATCGACAG TGACTTCCCA TATGTCAAAA TAGTCTCTGC AGAGGCTATG AATGGCCTTC ATGAGAGCAA AAAATGCGCA CACATTACCA AGGTCTTTGA AGATGCATAC AAATCACCAA TGAGCATAGT TATCCTTGAC GATATTGAAA GGCTGTTGGA GTACACTGAA ATTGGACCGC GATTTTCAAA CGAAATCCTT CAATCATTAT TGACTTTCCT CAAACAGTCT CCTCCTGGTG GAAGCAAACT TCTTGTACTT GGTACAACAA GTGAAGTAAC GTTCTTAAAA TCTGTTGGTT TGCGTAAAAC TTTTTCTGTT ACGTACTATG TTTCATTATT GAGGACAGAG GATGCCATGA AGGTGCTAGA GCAACTAAAC GTGTTCTCAG AAGATGATAT CGAAGAAGCT TCTGAAGCCC TTGATGATAT TCCAATAAAG CAGCTATACC TTCTTATGGA GATGGCAGCT CAAAGAGATG GTATGTCCAA AGAGCCGATC TACAACAGGA AGGAGAAACT CAACATCTGT CATTTCTTAG ATTGTCTTCA AGAAGTTAAC GGCTGCATCT GA 
Length2202
Protein Sequence
Protein Residue
Map Locationscaffold_7: 21356305.. 21360735
Download Sequence
A.thaliana
AGI-codeAT4G04910.1
DescriptionAAA-type ATPase family protein
TAIR curator summaryN-ethylmaleimide sensitive factor
Alias[NSF][N-ethylmaleimide sensitive factor]
Gene coexpression
MR
MR Locus Description
19.2873 Ahg335836 EF hand calcium-binding protein family
20.7846 Ahg936695 plastocyanin-like domain-containing protein
20.8567 Ahg354756 Galactose oxidase/kelch repeat superfamily protein
21.7715 Ahg942300
22.5832 Ahg314177 Protein of Unknown Function (DUF239)
27.6586 Ahg485404 hydroxyproline-rich glycoprotein family protein
29.5973 Ahg331706 oligopeptide transporter 9
40.1248 Ahg914348 Regulator of Vps4 activity in the MVB pathway protein
46.5081 Ahg888871 Pectin lyase-like superfamily protein
49.7795 Ahg319606 U-box domain-containing protein kinase family protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression