Detail



ID : Ahg914348

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|914348|Al_scaffold_0001_4602
Sequence
ATGTTTGGTT TCTTGCTCTG TCGACGGAAG AAAGCAAAAG CTTTCACATG GAAAGTGTTG AAGATGCTTC AATCTCGTCT TCTGCTACTC AAACACCAAA AGTATGCAAA AGCTAGACAT ATACGTATGG ATATTGCTGA CTACATCCGA AGCAATGAAT CCACCAATGC ACTCCTCCGA ACCGAACAGC TCTTCCTCGT CGAAAACTCG ATTTCAATCT ACGATTTGTT GCTTAAGTTC ACAGATTTCA TAATCCGACG CTTCTCCCCA ATTCGAAAAC ACGGAGAACT GGTTAATGAC GATACTTCGG AAGCAGTTTC GACTCTTATC TATGCATCGG TGAAGTGTAA AGATATACCT GAAATGCTTA CTTTAAGCGA GCTGGTTGGT CAACGTTATG GTCAACGTTA TGTAACAACT GCTATTCAGG TTCTCCCTGG GAATCTTGTA AACACGGAGA TCAAAAAGAA ATTGTCGATA TATTCAGTAT CCGAACATGT GAAGTGTCGA ATGGTGGAGG AAATAGCCAA GGAATCGGGT TACCGTTTAG AAATACTAAG GCTGGAACAT AAATCTGAGA ATGAAAACAA GGTATTTGAC GTGAAAGAGA AGAAAGTAAT GGATTTGGAT AAAGAAGAGA GAAGCAAGAA AGAGTCACCA CAGGAGGTGT ATAAATTTAT CCTCACCGAT GTCAAAGACG AGAGAAGCAA GAAAGAGACA TCAATGAAAG ATGATTACAT AGAAGATGTG ATGAAGTCTA GATTGTTGGC TGAAAAAGCG AAGAAGTCAG GTCACCGTTT AGAAATATTA AGGCCGGAAT ATAAACCTGA GATTGAAAAT CAGGTTTATG AAGAGGAAGA GAAGAAAGTA ATTGATCCGG ATATGGATAT TACATCTTAT GAAGAGCCAC CACACGAGGT GTATAAATTT AGCATCACCA ATTTCGAAGA AGGGATAATG GAAGATGATT ACGTAGAAGA TGTGAAGTGT AGAACGTTGG ATGAAATAAT GAAGAAATCC GGTCACCGTT TAGAAATATC AAAGCGGAAA TATAAACCTG AGAATGAAAA ACAGGTTTAT GAAGAGGAAG AGAAGAAAGT AATTGATCCG GATGTGGATA TTAGATCTTA TGAAGAGTCA CCACACGAGG TGTATAAATT TAGCCTCACC GATTTCGAAG AAGAGATAAT GGAAGATGAT TACATAGAAG ATGTGAAGTG TAGAATGTTG GATGAAATAA CGAAGAAGTC CGGTCACCGT TTAGAAATAT CAAGGCGTGA ATATAAACCT GAGAATGAAA AACAGGTTTA TGAAGAGGTA GAGAAGAAAG TAATTGATCC GGATGTGGAT ATGAGATCTT ATGAAGAGTC ACCACACAAG GTGTATAAAT TTAGCCTCAC CGATTTCGAA GAAGAGATAA TGGAAGATGA TTACATCGAA GATGTGAAGT GTAGATTGTT GGATGAAATA ATGAAATCCG GTCACCGTTT AGAAATATCA AGCCGGGAAT ATAAACCTGA GATTGAAAAA CAGGTCAATG AAGAAAAAGA GAAGAAAGTA ATGAATATGG ATATTAGATG TGCTGATCAG TCACCATACG AGGTGTATAA AATTAGCCTC ACCGATGTTG AAGAAGAGAG AAGCAAGGAA GATACATCAA TGGAAGATGA TTACATAGAA GATGGTCAAG TGGGAAAAGA TCAAAGAGTA TTCAGATTCC GAAAAAGTAG TGAAGAGAAG AGAAAACCAT CATCACCATT ATCAACACTA ATGGAGTTTA GGAATACGGA GAGTTTGACG TATTACATGA GGCAAACAAG GACTCATCAA AGAAGAAGAA GATCATCAAC ATCACCACAT TGTCGCCATT GTGTAGAATA CAATGAGTTC AAAGTGAAGA AGGAAGAAGA AGAAGAAGAA GAAGAAGAAA GACAAAGCTT AAAAACCAAG AATGTTCATT CGAAGCTTCA TGAGTACGAA AAGTTTTTAA CTCAGTTTAA AAAGAAGAAG GAAGCAGAAA ACGAGAGACG AAGATTATTC CCCAAAGGCT TTGAGCCTAC GCTTCCTGAT TACGACGAAG TTATTACTCG GTTTAGAGCG CTGGAGGCAC AAGAAGAAGA AAGACAACGA TTAGCAGCAA CAAAACATAT TCATCCTAAC CTTCCTGATT ACGACCAAAT TGTTACTCAG TTTAAAGCGC TAAAGGAAGA AGAAAAACAA GGACAAAGAA TACGAACAAA ATGA 
Length2244
Protein Sequence
Protein Residue
Map Locationscaffold_1: 26251496.. 26255029
Download Sequence
A.thaliana
AGI-codeAT1G51900.1
DescriptionRegulator of Vps4 activity in the MVB pathway protein
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
6.7082 Ahg936150 F-box family protein
10.4881 Ahg355413 DNA (cytosine-5-)-methyltransferase family protein
16.1245 Ahg478549 Jojoba acyl CoA reductase-related male sterility protein
22.1811 Ahg351608 Protein of Unknown Function (DUF239)
22.3607 Ahg351609 Protein of Unknown Function (DUF239)
23.7697 Ahg320424 AGAMOUS-like 33
26.8328 Ahg484455 AP2/B3-like transcriptional factor family protein
30.1662 Ahg484096 RING/FYVE/PHD zinc finger superfamily protein
31.5278 Ahg931789
32.7872 Ahg323966
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression