Detail



ID : Ahg356074

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|356074|fgenesh1_pg.C_scaffold_7003247
Sequence
ATGGAACTCT TAAAAAGATT ATTATATGCA AAAATTTTGA TGATGGTAAT GGTGATATGG ATAGCACCTA TGACATACGG TCATGGTCAT GCAACCCACG TACCCGGTGG AAGAACCGGC CCACCCATGA CTGGTGCCCA CCCTTCCCAT GGTGCCCACC CTTCCCATGG CGTCCACCCA TCCCATGGCT CCCAACCTTC CCATGGCGCC CACCCATCCC ATGGCGCCCA TCCATCCCAT GGCGGCCTTG GGCCGCATTC TGGTTGGGGT CATGGCCGTG CCACATTTTA CGGTGACATC AATGGTGGAG AAACTCAACA GGGAGCTTGT GGATATGGTG ATCTACACAA ACAAGGATAT GGTCTAGAGA CAGCAGCACT AAGCACCGCA CTATTTAACA ACGGCTCAAG GTGTGGGGCT TGTTTCGAGA TCAAGTGCGT AGATGCTCCA CAATGGTGTT TGCCAGGTTC CATCAAGATC ACAGCTACAA ACTTCTGTCC ACCAGATTTC TCCAAGCCCA AAGACTGTTG GTGCAACCCG CCACAAAAAC ACTTTGATCT CTCGCAACCA ATGTTCCTCA AAATTGCCAA ATACAAAGCC GGGGTTGTCC CGGTTAAATT TAGACGTGTT CCTTGTGCGA AAATCGGAGG TGTCAAGTTT GAAATCAAGG GAAACCCTCA TTTCTTAATG ATCTTACCGT ACAATGTAGG AGGAGCTGGA GATGTTAGGG CCATGCAAGT TAAGGGAACG AGGACCGAGT GGATTGCGAT GAAGAAGAAT TGGGGACAGA TTTGGAGCAC TGGTGTTGTG TTGACCGGAC AATGTTTATC GTTTAGGGTT ACGACAAGTG ATGGAATTAC GAAAGAGTTT ATTGACGTTA CCCCGCCGGA TTGGAAATGT AATGGACAGA GTTTTGATGG AAAGATTAAT TTTTAG 
Length936
Protein Sequence
Protein Residue
Map Locationscaffold_7: 21923310.. 21924596
Download Sequence
A.thaliana
AGI-codeAT5G39310.1
Descriptionexpansin A24
TAIR curator summarymember of Alpha-Expansin Gene Family. Naming convention from the Expansin Working Group (Kende et al, 2004. Plant Mol Bio)
Alias[ATEXP24][ATEXPA24][ATHEXP ALPHA 1.19][EXP24][EXPA24][expansin A24][EXPANSIN 24]
Gene coexpression
MR
MR Locus Description
6.32456 Ahg471713 pleiotropic drug resistance 7
6.63325 Ahg930033 Integrase-type DNA-binding superfamily protein
7.68115 Ahg951925
9.38083 Ahg890287 Protein of unknown function (DUF1264)
9.94987 Ahg351609 Protein of Unknown Function (DUF239)
10.8167 Ahg920128
10.9545 Ahg906590 Cysteine/Histidine-rich C1 domain family protein
11.1803 Ahg892274 SGNH hydrolase-type esterase superfamily protein
12 Ahg925744
12.6491 Ahg931779 glycine-rich protein 2B
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression