Detail



ID : Ahg356279

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|356279|fgenesh1_pg.C_scaffold_8000066
Sequence
ATGGGGAAGC AAGGTCCTTG CTATCACTGT GGAGTTACAA GTACACCTCT ATGGCGAAAC GGGCCACCAG AGAAGCCGGT GTTGTGCAAT GCGTGTGGTT CGAGGTGGAG AACTAAAGGA TCATTAGTAA ACTACACACC TCTTCATGCG CGTGCTGAAG GTGATGAGAT TGAGATTGAG GATCATAGAG CTCAAAGAGT GATGATTAAG GGAATGTCTT TGAACAAAAA GATTCCCAAG AGGAAACCAT ATCAAGAAAA TTTTACAGTT AAAAGAGCTA ACTTGGAATT CCATGCCGGT TTCAAGAGGA AGGTTCTGGA TGAAGAAGCT AGCAATAGAT CGAGTTCAGG ATCGGTTGTA TCAAACTCCG AGAGCTGTGC ACAATCTAAT GCATGGGACG CGACTTTTCC TTGTAAGAGG AGGACATGTG TGGGCCGTCC AAAGGCAGCT TCTTCTGTTG AAAAGCTCAC AAAGGATCTC TATACTATTC TACAAGAACA ACAATCTTCT TGTCTCTCTG GTACTTCAGA GGAAGATTTG CTTTTTGAGA GTGAAACACC AATGTTGTTA GGACATGGGA GTGTTCTTAT GAGAGATCCT CACCCGGGTG CTCGAGAAGA GGAATCTGAA GCTAGCTCAC TCTTAGTTGA GAGCAGCAAG TCCTCATCAG TTCATTCTGT GAAATTTGGT GGAAAGGCAA TAAAGCAGGA GCAACTGAAG AGGAGCAAAT CTCAAGTCTT AGGACGACAT AGTTCACTAC TCTGTAGCAT AGATTTGAAG GACGTTTTCA ACTTTGATGA GTTCATAGAA AAATTCACAG AGGAAGAACA GGAAAAACTG ATGAAACTAG TTCCTCAAGT TGACTCTGTT GATCGTCCTG ATAGCCTCAG AAGCATGTTT GAGAGTTCTC AATTCAAAGA GAACTTATCC TTGTTTCAGC AACTTGTGGC AGATGGTGTT TTTGAGACAA CTTCGTCTTA TTCCTCTGCA TCAAAACTTG AAGACATTAA GACACTTGCA AAGCTTGCTT TATCAGATCC TAACAAATCC CATTTGTTGG AAAACTATTA CATGCTCAAG GAACAGAAAA AAAGGACTGA AGACTCTGTT ACTACAGCAT CAACGGTCTC AAACCTGAGT CCATCAAAGA ATAATAGTCT TGTAACTATT GAAAGACCTT GTGAAAGCTT AAACCAAAAC TTCTCAGAGA CAAGAGGTGT GATGAGAAGC CCCAAAGAAG TGATGAAGAT TAGATCAAAG CACATCGAAA CCAAAGAGAT TTTAGAGAAC AGTGTCTCTT CCTTTAAACC TATGAGCTGT GGTGGACCTC TGGTGTTTAG CTATGAAGAT AATGATATTT CTGATCAGGA TCTTCTTCTT GATGTGCCGT CGAACGGCTC ATTCCCTCAA GCAGAGCTTC TTCACATGAT ATGA 
Length1434
Protein Sequence
Protein Residue
Map Locationscaffold_8: 388794.. 391000
Download Sequence
A.thaliana
AGI-codeAT5G47140.1
DescriptionGATA transcription factor 27
TAIR curator summaryEncodes a member of the GATA factor family of zinc finger transcription factors.
Alias[GATA27][GATA transcription factor 27]
Gene coexpression
MR
MR Locus Description
7.34847 Ahg345735 Prenyltransferase family protein
14.8661 Ahg486542 SAUR-like auxin-responsive protein family
21.4942 Ahg488687 UTP:galactose-1-phosphate uridylyltransferases;ribose-5-phosphate adenylyltransferases
46.2817 Ahg471173 Cysteine proteinases superfamily protein
48.1456 Ahg943489 Concanavalin A-like lectin protein kinase family protein
53.3667 Ahg355638
56.5685 Ahg484424 armadillo repeat only 4
57 Ahg931532 transportin 1
57.3934 Ahg936910 Pectin lyase-like superfamily protein
64.0156 Ahg491260 UDP-glucosyltransferase 73B2
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression