Detail



ID : Ahg936910

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|936910|scaffold_501101.1
Sequence
TTCTTCTTCT TCCTCTAAAT CCAAAAACCA TGGTAGATCC TCTTCCCAGA CGTTTCCTCT CTTCCCACAA ATCTCTCGTC ACTGTTTTCT GGATCGCCAC TTTCGCTTCC TTATTCATCT GGCAATTCGG CGGCGTTTCT ACAAATCTCT ACACTGGTTT CTCCGTTTTC TGGTCGTCTT CAACAACAAC CACCGCAGCC TCCGGAGAAT TCCCGAAGCT CAGACCTGTA GTTTTCAATT TAACAGACTT TGGTGCCGTC GGCGATGGTG TCACAGTCAA CACTGAGGCT TTCGAGAGAG CTATTTATAA GATCTCTAAG CTTGCTAAGA AAGGAGGTGG TCAGCTTAAT GTTCCTCCTG GTCGTTGGCT CACTGCTCCG TTTAATCTCA CTAGTTATAT GACTCTTTTC CTCGCCGAGA ACGCCGAGAT TCTCGCTCTT CAGGATGAAA AGTATTGGCC CTTACTTCCT CCTTTACCTT CATATGGTTA TGGAAGAGAG CATCATGGAC CTCGTTATGG AAGTTTCATT CATGGACAGA ATCTTAGAGA TGTTGTTGTC ACAGGGAATA ATGGTAGCAT CAACGGTCAG GGGCAAACGT GGTGGAAGAA GTATCGCCAA AAGCTGCTTA ACCACACGAG AGGACCCCTG GTGCAGATAA TGTGGTCAAG TGACATTGTT TTTGCCAATA TCACTTTGCG CGATTCTCCA TTTTGGACGC TTCACCCATA TGACTGCAAA AATGTAACAA TCACAAATAT GACCATTTTG GCACCTGTGT TCGAAGCCCC AAACACTGAT GGTATCGATC CTGATTCGTG TGAGGACATG TTAATCGAGA ACTCTTACAT TAGCGTTGGG GATGATGGAA TCGCCATAAA GAGCGGTTGG GACCAGTATG GAACTACCTA TGGACGACCT TCAAAGAACA TACTCATCCG CAACCTCATC ATCCGCTCCA TGGTTAGCGC TGGTATATCA ATAGGAAGTG AGATGTCTGG TGGTGTCTCA AATGTCACAG TCGAGAATAT TCTGATATGG AGCTCCCGGC GTGGAGTTAG GATTAAAACC GCACCAGGAC GAGGTGGGTA TGTCCGGGAT ATAACATTTC GGAATGTCAC ATTGGATGAA TTGAGAGTTG GCATTGTCAT TAAAACGGAC TACAACGAGC ACCCAGATGG TGGATTCAAT CCTCAAGCCT TCCCGATACT CGAGAACATA AACTACACCG GGATTTACGG TCAAGGAGTG CGTGTACCAG TGCGTATCCA AGGAAGCAAA GAGATTCCGG TTAAAAATGT AACCTTCAGG GACATGTCAG TGGGGATAAC ATACAAGAAA AAGCACATAT TTCAGTGTGC GTACGTGGAG GGGCGTGTGA TAGGCACCAT CTTCCCAGCT CCGTGTGAGA ACCTTGATAG GTATGATGAG CAGGAACGGT TGGTGAAGCA ATCTGATTCC CAGAATGCAA CAGATATAGA CTACGAGATA TGACCAACAA GAGACATGGG TTT 
Length1513
Protein Sequence
Protein Residue
Map Locationscaffold_5: 9298804.. 9301674
Download Sequence
A.thaliana
AGI-codeAT3G42950.1
DescriptionPectin lyase-like superfamily protein
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
8 Ahg921768 Galactose oxidase/kelch repeat superfamily protein
15.0997 Ahg910459 Thioredoxin superfamily protein
25.2389 Ahg477315 NAD(P)-binding Rossmann-fold superfamily protein
25.6905 Ahg920352 Mitochondrial substrate carrier family protein
28.6356 Ahg476614 Nodulin-like / Major Facilitator Superfamily protein
32.1714 Ahg487278 EAP30/Vps36 family protein
36.1109 Ahg484065 SEC12P-like 2 protein
52.3832 Ahg894082
56.4801 Ahg486329 citrate synthase 2
57.3934 Ahg356279 GATA transcription factor 27
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression