Detail



ID : Ahg358254

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|358254|fgenesh1_pg.C_scaffold_8002041
Sequence
ATGGTGAAGA AAAGCAAAGG TCGTCAAAAA ATAGAGATGG TCAAAATGAA AAATGAAAGT AACCTCCAAG TTACTTTTTC AAAAAGAAGA TCCGGACTTT TCAAGAAGGC TAGTGAGCTT TGCACACTTT GTGGTGCAGA AATCGCCATA GTTGTGTTTT CACCTGGTCG AAAAGTCTTT TCTTTTGGCC ATCCTAATGT TGAATCTGTA ATTGATCGAT TTTTAAACAA TAACCCTCCA CTTTCTCACC AACACAACAA CATGCAACTT AGTGAGACTC GTCGAAACTC TATTGTTCAG GAGCTGAATA ATCATCTTAC TCAGGTGTTG AGCCAATTAG AATCGGAGAA AAAGAAGTAT GATGAGTTAA AGAAAATAAG AGAAAAAACA AGAGCCCTTG GGAATTGGTG GGAAGATCCC GTTGAAGAAC TTACATTACC TCAACTCGAT GGATTCAAAG GTAATCTTGA AAATTTGAAG AAAGTAGTTA CAGTCGAAGC CTCCAAATAT TTTCAAGCAA CTGTTCCAAA CTTCTATGTC GGAAGTTCTA GTAATGCTGC TTTTGGGATT GATGATGGTA GTCATATCAA CCATGATTTG GACCTCTTTA GCCAAAGAAG AATGATGGAC ATAAATGCAT TCAACTACAA CCAGAACCAG ATTCACCCTA ATCCCGCATT ACCGTTTGGA AACAATGCTT ATGGTCATAT TAATGAAGGA TTTGTTCCGG ACTACAATAT GAACTACAGA CCAGAGTATA TCCAAAACCA ATACCAAAAC CAAAACCAAA ACCTGAGTTT TAAGAGAGAA AACATCTCTG AATATGAGCA CCATCATCAT GGTTATCCTC CCCACTCTAG ATCTGATTAC TATTAA 
Length876
Protein Sequence
Protein Residue
Map Locationscaffold_8: 18338751.. 18339962
Download Sequence
A.thaliana
AGI-codeAT5G60440.1
DescriptionAGAMOUS-like 62
TAIR curator summaryAGL62 encodes a Type I MADS domain protein that likely functions as a transcription factor. It is expressed AGL62 is expressed exclusively in the endosperm. AGL62 supresses suppresses cellularization during the syncytial phase of endosperm development.
Alias[AGL62][AGAMOUS-like 62]
Gene coexpression
MR
MR Locus Description
8.48528 Ahg907953
28.8444 Ahg949333 C2H2-like zinc finger protein
29.0861 Ahg921560 FBD, F-box and Leucine Rich Repeat domains containing protein
30.3315 Ahg334132 Aluminium activated malate transporter family protein
42.107 Ahg940686 Protein kinase protein with adenine nucleotide alpha hydrolases-like domain
42.7083 Ahg493352 HXXXD-type acyl-transferase family protein
46.2601 Ahg478689
64.6529 Ahg933779 Domain of unknown function (DUF313)
67.8675 Ahg947246
69.6419 Ahg904679
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression