Detail



ID : Ahg359800

Blast(Query) A.halleri   /   A.thaliana (NOT RECIPROCAL)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|359800|fgenesh1_pg.C_scaffold_1105000001
Sequence
AATCCAGCTC GTGTTGTATA TGTCATGGAT AGCAGTATTG GTCAAGCTGC ATTTGATCAA GCTCAAGCAT TCAAGCAATG TTTCACTCGT GGAGTTGTCA TTATTACTAA TATACACGGC AACTCCAAAG CATGTGGTGC TATCATCTCT GTTGCAGCAG CAAAGTGTCC CATGATATTA GCTGAAACAG GAGAGAAGAG AGAGGATTTT GAAGCATTTG AAGCTGAAGC TTTTGTCAGG AGTCTCTTGA AAAATCCATG GGATAAGCCC TATGAATATA CTTTGAGACT AATGTATCAT CATTATAGGC GAGAATTAGG ATTGGAGAAA AATGTGTTCG AAGCTAAACC AGAGAAGTAT AGGCGGTGCA CGACAATAAT GGAGTCCATG ACAGATGAAG AGCTTGATAA CCCAAACGTA ACGCAAATGA GCGAGGAACG GATGATGGAG ATAGCTGAAG CATCAAAAGT AGATGTGAAA CAAGTTGTGC AAATGATGAT AACGTTCAAG ATCAAGGCCA AGGGGGTTAT GGAGCTTGAG GAGAGGAGTC GCAATGAATC TGATAGACCG CCCAAATTAA ATTGCGCTTT TCCAACGTCT GAGCTTACAA ATTATGCATA A 
Length621
Protein Sequence
Protein Residue
Map Locationscaffold_1105: 90.. 1127
Download Sequence
A.thaliana
AGI-codeAT1G15310.1
Descriptionsignal recognition particle 54 kDa subunit
TAIR curator summary54 kDa protein subunit of SRP that interacts with the signal peptide of secreted proteins
Alias[ATHSRP54A][SRP54-1][signal recognition particle 54 kDa subunit][SIGNAL RECOGNITION PARTICLE 54 KDA SUBUNIT]
Gene coexpression
MR
MR Locus Description
1 Ahg332873 P-loop containing nucleoside triphosphate hydrolases superfamily protein
43.6348 Ahg932662
47.0744 Ahg483366 Ribosomal protein L1p/L10e family
63.9922 Ahg489170 Peptidoglycan-binding LysM domain-containing protein
77.0714 Ahg358710
87.2009 Ahg349470 Mitochondrial substrate carrier family protein
94.2337 Ahg479673 transducin family protein / WD-40 repeat family protein
97.103 Ahg946342 Pentatricopeptide repeat (PPR) superfamily protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression