Detail



ID : Ahg489170

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|489170|fgenesh2_kg.6__2304__AT5G23130.1
Sequence
TGTGTCGTTG GCCGGTGGCG ACGAGAGGGA GAAGAGATCT CTCGTTCGTT TTCCCCGGAA ACTCCGGCGA GAAAAAAAAT TCGTTCCCTT CCACTCCACC AGTTTTCACC TCTCTTCTTC AATCTCTCAT CGTCTCTTCC TCGTTTCTCG TTTTCGCTTT TTCCCCTTTC CTCTTCGATT TTACTGGAAT CCGAGAATTT TTGATCAGAT CTAGTTTCAG AAATAGGTTA GATGCTTACT GATCGAGGGA GAAGGATTTC TGGTTGCAAT GTGAGTTTTG AATTCCGTGG TGATTATGGT TACGGATTCG TAGATCGATC TCAAGGTTGC CATGAAAGGA GTCCTTCAAG ATCATTGTCT GTTTCGAAAA TCCTTCGTAT CACATCACCG ACCTTGTCTC CACCGTCGTC GACTTCTACC GGCGCTGGTT ATATCGAACA CCGGGTTTCC AAGTTCGATA CTCTCGCCGG CATTGCCATA AAGTATGGCG TGGAGGTTGC AGATATCACG AAGCTGAATG GGCTTGTTAC TGATCTTCAG ATGTTTGCTC TTAAGTCTCT CCGGATACCA TTACGTGGAA GACATCCTCC TTCTCCTTGC TTATCTAACG GCTCCCTAAA TCATGGAGAG GATTGTTCCG AGCAAGCTTC ATCATCGGCA AGCAATGGCA ACCACCAAGA CGTATTTGAC TCCTTTCAGT CTTTGAGGCT GAAGCCTCCA GAAAAGAAGA TTTCTCCAGC CATGAACTCC TTGCAAGGTT ATTATGGACT GAAACCAAAA ACCAGAAGAG CTTCCGAAAG TTTTGAGATG GCAGTCTGCA AGAACAAAGC TTCTCATCTC CAACACGATG GTCAGTACCT CACTCCCTTC CCAGCCACCA ATACTCCCTT AAGCCACCAC AGAAAATCAA GAAGTTTGGT CGATGCAGTT GTCGCTGAGG TCAACCAATC ACCCAACCCT TCAAAAGCAG GAGGAGGAGA AGTGAATTCT GACAAGCCAA TGAGAAGACG CCAAAAATCT GAAACCGATT TTAGTTCACG AGCTCCAGAA TTGCTGTTGA AGGAAGAGAA CAGAAGCAGC AATGGCGCGT TTTCTGCAAT AGCTGGGAAA AATTTAGCAC TGAGATCCAA AGCAGCAGGC AGAGCTAATG TTTCAACAGA TACTGAGAAT GGTAATGTCA ATTCCATACC AATCAGTTTG ATGGATGCTC CTGTGGGAGT GGGAGACAGC TTCTCAAGCG TGAGGAAATC GTTTAGCGCA TCTAGTCTGC AAGAATCGGA TTGTACCAGC AACGGTTCAT CGCTATGGTC AACCTCGAAG TGGACCCTGA AACCTGATTT GCTCACACAG GCAGCCATGG CGAGTTCTAT TTTTGACGGA TTGCCTAAGC CTTTAACAGG TCGGAGAAAC AAAAAAGCTG TGGACTAAGG ACTAAGGTTA GTTAGGTCTT TTGGTTTTTG TAATCCATAA GCAAGAACTC GATGGCTATT AGATTGGGGA GTAAATAGAA GTAAAAAGTG TATTATTGCA TTTCATTTAT TAAAAACAAT AAGTCAAAAA ATTAGGCATT AAGGTTTTGG TGAATCTAAT TTGTATGTTA GATG 
Length1604
Protein Sequence
Protein Residue
Map Locationscaffold_6: 3089611.. 3090125
Download Sequence
A.thaliana
AGI-codeAT5G23130.1
DescriptionPeptidoglycan-binding LysM domain-containing protein
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
22.4944 Ahg473172 MAC/Perforin domain-containing protein
48.2183 Ahg888459 Senescence/dehydration-associated protein-related
63.9922 Ahg359800 signal recognition particle 54 kDa subunit
74.2159 Ahg939270
77.1492 Ahg893621 Cystatin/monellin superfamily protein
79.5864 Ahg484476 hydroxyproline-rich glycoprotein family protein
86.4639 Ahg494273 Protein kinase superfamily protein
86.8792 Ahg485749
99.0555 Ahg490381
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression