Detail



ID : Ahg470261

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|470261|fgenesh2_kg.1__215__AT1G02900.1
Sequence
AAAATGGCCA AGTCCTTCCC TCTGTTCTTA AGTCTTACGA TTCTCATAAT TTTCATCATC TCTTCACCTC CGGTCCAAGC CGGCTTCGCC AACAACCTCG ATGGTCTAGA ATGGGCTACG AATGGAGTCC ATGGTTCAGG CTGCCACGGT TCAATAGCAG AGTGTATCGG AGCGGAGGAA GAAGAAATGG ACTCAGAGAT CAATAGAAGA ATATTGGCGA CCACAAAATA CATAAGTTAT CAATCTTTGA AACGGAACAG TGTACCTTGT TCAAGAAGAG GTGCGTCTTA TTACAATTGT CGGAACGGAG CTCAGGCTAA TCCTTATAGT CGTGGTTGCA GCGCAATTTC GCGATGCAGG AGTTAGAATT ACAAAAAAAG AAGGCTATAT ATCTTCTTGA TCTTGACTTA TGTTTTCTTT GATCCATCAA GTGTTTTTAT TTTTATTAAA TATTCATCAT GTCTCTGCAC AATAGTAAAA ACCTATGTTT TGATCAAACC GGGTTGCTTT GTTATATTGT ATGTGAATAA TCAGGGTCTT AATGATCCAT GAAGT 
Length555
Protein Sequence
Protein Residue
Map Locationscaffold_1: 754656.. 755212
Download Sequence
A.thaliana
AGI-codeAT1G02900.1
Descriptionrapid alkalinization factor 1
TAIR curator summaryMember of a diversely expressed predicted peptide family showing sequence similarity to tobacco Rapid Alkalinization Factor (RALF), and is believed to play an essential role in the physiology of Arabidopsis. Consists of a single exon and is characterized by a conserved C-terminal motif and N-terminal signal peptide. Mediates Ca2+-dependent signaling.
Alias[ATRALF1][RALF1][RALFL1][RAPID ALKALINIZATION FACTOR 1][rapid alkalinization factor 1][RALF-LIKE 1]
Gene coexpression
MR
MR Locus Description
4.12311 Virus3899
8.12404 Virus3286
13.2288 Virus1295
13.2288 Ahg923468
13.2288 Virus0426
29.7321 Ahg948387
30 Ahg907360 SCR-like 5
32.6343 Ahg893297
42.1663 Ahg355262
45.1774 Ahg494339 MADS-box family protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression