Detail



ID : Ahg470321

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|470321|fgenesh2_kg.1__275__AT1G03457.2
Sequence
AGAGAGAGAG AGAGAAACAA TGGCGGAGGA GACGATGGAG AACGAAGAGA GGGTGAAGCT GTTCGTCGGA CAAGTTCCGA AGCATATGAC GGAGATTCAG CTCCTCACAT TGTTTAGCGA ATTCTCCATC GTCGATGAAG TCAACATCAT TAAGGAGAAG ACTACACGAG TTCCCCGAGG ATGTTGTTTT CTGACATGTC CTTCAAGGGA AGAAGCTGAC AAGGTGATCA ATGGTTTTCA TAACAAGAAG ACATTGCCTG GGGCATCTAG TCCGTTACAA GTTAAGTATG CAGATGGCGA GAGGGAAAGG CTAGATGTTC TTGACTGTTC TTGCAATCCA GAGCACAAAC TTTTCGTCGG TATGCTTCCA AAGAATGTCT CTGAGACTGA AGTCCAATCC TTATTCTCCG AATACGGAAC CATTAAGGAT CTACAGATTC TAAGAGGGTC TCTACAAACT AGCAAGGGCT GTCTGTTTCT AAAGTATGAG TCTAAAGAAC AAGCAGTCAC AGCTATGGAA GCCCTCAACG GAAGACATAT AATGGAGGGA GCAAATGTTC CTTTGATTGT CAAATGGGCA GACACAGAAA GGGAAAGACA AGCCCGAAGA CTTCAAAAAG TTCAATCTCA TGTCTCCAGA CCCGATCCGC AAAACCCCTC CATGTTTGGG GCATTACCTA TGGGTTATGT TCCTCCCTAT AATGGATATG GCTATCATGT ACCTGGAACC TATGGGTACA TGCTACCACC TATCCAGACT CAACCTGCAT TTCACAATGT GATTTCACCG AACCAAGGTA ACGGAAGAGC ATTGCTGGGA ACCGCTTTGA CCGAGTCTGT CCCACCACGT TTAGCCGCCC GTAGAAACTT CCCAACGGCT CTTGGAAATT ACGGTTACCA TGGTCTTCAA TATCCTATGG CATTTCCTAG AGGGATGATA CCTCCTCGCC CCCCTCTAAC CACAGTTTCA CCTGGAATTT CTAACAACGG CACATCGATA CCTTCCTTGC TTCAAACAGA AGGACCAGCA GGTGCGAATC TATTTATTTA TAACATACCA CGAGAATTCG GGGATCAAGA ACTCGCAGCT GCGTTTCAAC CTTTTGGTAA GGTTCTAAGC GCCAAGGTGT TTGTAGACAA GGCCACTGGT ATAAGCAAAT GTTTCGGATT CATTAGTTAT GACTCACAAG CAGCTGCTCA GAACGCTATT AATACAATGA ACGGTTGCCA ATTAAGCGGT AAGAAATTGA AAGTCCAGCT TAAGAGAGAC AACGGTCAAC AACAACAGAG TAACAAACCG TTATTTAACG GTTTATTAAA CTCGTAAAAA CCACTGACAT CTCTTCATCA TTAAGAGTTC GCGCGGTTAA CGGCAACTCC GGTTTAGACA TTAAGATGGA TCTTGATGGA ACTGGAGAAC AAAAAATGTT GGCCGTTATT AACTAACATT TGCCAAGTCT GATCATGTCA TGTGGGTCGT CAGAAATTCT CAATCACTCA GAAAAGCTGT ATCTTCCTGC AAAAGGGATT CTCCTCCACT CACTCTTCTT CTATTTTTCT TTTCTAAAAT TTGCGTCACT ACAATTTTTG TCTGTCATTC AAAAGTTCAT GTATAAATGT TATGATTATT AACCATTCTA AATTCATTTA T 
Length1651
Protein Sequence
Protein Residue
Map Locationscaffold_1: 967735.. 971141
Download Sequence
A.thaliana
AGI-codeAT1G03457.2
DescriptionRNA-binding (RRM/RBD/RNP motifs) family protein
TAIR curator summary
Alias[AtBRN2][BRN2][Bruno-like 2]
Gene coexpression
MR
MR Locus Description
40.6448 Ahg480800 thymidylate synthase 1
40.8656 Ahg477950 HCO3- transporter family
42.45 Ahg495973 Glutaredoxin family protein
43.2435 Ahg921560 FBD, F-box and Leucine Rich Repeat domains containing protein
43.5086 Ahg471538 XH/XS domain-containing protein
46.3681 Ahg470222 beta-xylosidase 2
58.258 Ahg931493 proteinaceous RNase P 2
64.0937 Ahg901222 homeobox-3
69.4766 Ahg357414 Protein kinase superfamily protein
79.3914 Ahg892274 SGNH hydrolase-type esterase superfamily protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression