Detail



ID : Ahg470387

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|470387|fgenesh2_kg.1__341__AT1G04110.1
Sequence
ATGGAACCCA AATCCTTCCT ACTCTGCATT ATCTTTCTTC TCTTCTCTTC TTCTTCTTCT TCTTCCTCAG AAATCCTGCA GAAACAGACT TACATTGTTC AGCTTCATCC TAATACCGAA ACCGCTAAAA CATTTGCCTC AAAGTTTGAT TGGCATCTTT CTTTTCTCCA AGAAGCGGTT TTGGGTGTTG AAGAAGAAGA GGAAGAGCCT TCTTCACGAC TTCTCTACTC CTATGGCTCT GCGATTGAAG GATTTGCTGC TCAGTTGACT GAGTCAGAAG CCCAGATGCT GAGATATTCA CCTGAAGTTG TTGCAGTGAG ACCTGACCAT GTTCTTCAAG TTCAAACCAC TTACTCTTAC AAGTTCTTGG GACTCGACGG TTTTGGAAAC TCGAGTGTAT GGTCTAAATC TCGGTTTGGT CAAGGCACAA TTATCGGCGT GCTTGATACT GGAGTTTGGC CTGAAAGTCC TAGCTTTGAC GATACCGGAA TGCCTTCGAT TCCACGGAAA TGGAAAGGGA TTTGCCAAGA AGGAGAGAAT TTCAGTTCCT CGAGCTGTAA CCGGAAGCTA ATCGGTGCTA GATTCTTCAT CAGAGGACAC CGTGTCGCTA ATTCACCAGA GGAATCACCA AACATGCCCC GTGAATACAT TTCCGCAAGA GATTCAACGG GACACGGGAC TCATACCGCT TCAACAGTTG GTGGATCCTC TGTTTCGATG GCGAATGTTC TTGGCAATGG AGCTGGTGTG GCTCGTGGGA TGGCTCCTGG AGCTCACATT GCAGTCTATA AAGTCTGTTG GTTCAATGGT TGTTACAGCT CTGACATTCT AGCAGCTATA GATGTAGCGA TTCAAGATAA AGTCGACGTT CTTTCTCTTT CCCTTGGCGG TTTCCCGATT CCTTTGTATG ATGACACAAT CGCCATTGGA ACATTCCGAG CCATGGAACG TGGTATATCT GTAATATGTG CAGCTGGTAA CAACGGTCCA ATCGAAAGCT CTGTTGCAAA CACAGCTCCT TGGGTCTCAA CCATTGGCGC AGGCACGCTT GATCGAAGAT TTCCCGCTGT GGTCCGATTA GCCAACGGAA AGCTTCTGTA TGGAGAGTCG TTGTATCCCG GGAAAGGTTT AAAGAATGCT GAGAGAGAGG TTGAGGTGAT TTACGTCACA GGAGGAGATA AAGGAAGTGA GTTCTGTTTG AGAGGGTCAC TTCCAAGAGA GGAAATCCGA GGCAAAATGG TTATTTGTGA TCGCGGCGTC AATGGAAGAT CTGAGAAAGG AGAAGCGATT AAAGAAGCAG GAGGAGTTGC AATGATCTTA GCCAACACAG AGATCAACCA AGAAGAAGAT TCTATTGACG TTCATCTCTT ACCAGCTACA TTGATTGGTT ACACCGAGTC AGTCCTTCTG AAAGCTTATG TTAATGCCAC GGTGAAACCA AAGGCGCGGA TAATTTTTGG TGGTACAGTG ATTGGGCGGT CACGAGCACC GGAAGTGGCT CAGTTTTCAG CTCGAGGACC GAGTTTAGCC AATCCTTCGA TACTAAAACC GGATATGATT GCTCCGGGAG TCAATATCAT TGCGGCTTGG CCTCAAAATC TAGGACCAAC CGGACTTCCT TATGATTCAA GAAGAGTTAA CTTCACTGTA ATGTCAGGAA CTTCAATGTC TTGTCCACAT GTTAGCGGAA TCACTGCTCT TATCCGGTCT GCATACCCGA ACTGGTCTCC CGCTGCAATC AAATCCGCAT TGATGACAAC AGCGGATTTG TATGATCGTC AAGGGAAAGC GATAAAGGAT GGTAACAAAC CAGCAGGTGT GTTTGCGATT GGAGCAGGGC ATGTGAATCC GCAAAAGGCG ATAAACCCGG GATTGGTTTA CAACATTCAA CCAGTGGATT ACATTACTTA CCTCTGCACT CTTGGATTCA CAAGATCAGA CATTTTAGCA ATCACTCATA AGAACGTGAG CTGCAGCGGA ATATTGCGGA AAAACCCGGG TTTTAGCCTC AATTACCCGT CGATATCCGT GATTTTCAAA CGTGGCAAGA CTACAGAGAT GATCACAAGG CGTGTGACTA ACGTTGGGAG TCCAAACTCG ATATACTCAG TGAATGTTGA GGCTCCAGAA GGGATCAAAG TGATTGTAAA TCCTAAGAGA CTTGTATTCA AACACGTGGA TCAGACGCTG AGCTATCGAG TATGGTTTGT ATTGAAGAAG AAAAACAGAG GAGGGAGGGT GGCTACGTTT GCACAGGGAC AGTTGACTTG GGTCAACTCT CAGAATCTGA TGCAGCGAGT TAGAAGTCCA ATCTCTGTAA CCTTGAAGAC TAACTGA 
Length2337
Protein Sequence
Protein Residue
Map Locationscaffold_1: 1212379.. 1214718
Download Sequence
A.thaliana
AGI-codeAT1G04110.1
DescriptionSubtilase family protein
TAIR curator summaryInitially identified as a mutation affecting stomatal development and distribution. Encodes a protein similar to serine proteases.
Alias[AtSDD1][SDD1][STOMATAL DENSITY AND DISTRIBUTION 1]
Gene coexpression
MR
MR Locus Description
6.08276 Ahg472662 MLP-like protein 423
9.05539 Ahg477690 Li-tolerant lipase 1
10.247 Ahg470654 Fatty acid desaturase family protein
11.8322 Ahg926666 Glucose-methanol-choline (GMC) oxidoreductase family protein
18 Ahg482818 glycerol-3-phosphate acyltransferase 6
18.4932 Ahg492964 GDSL-like Lipase/Acylhydrolase superfamily protein
18.8149 Ahg927503 Leucine-rich repeat (LRR) family protein
18.9737 Ahg920750 Pathogenesis-related thaumatin superfamily protein
19.3649 Ahg486566 FASCICLIN-like arabinogalactan-protein 10
22.9783 Ahg470918 syntaxin of plants 111
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression