| Annotation |
|---|
| Description | jgi|Araly1|926666|scaffold_202227.1 |
| Sequence |
GCTCTTCAGT TTTGGTTTCT GCAGTCTCCA ATGGCTCTCA AGCTCTTTCT CTTTGCTCTT CTTCTCTGTC TCCCGACTTC TCTCTCATCC ACGGCCTCTA AAGGTAAAGA GAAGAAGTCA AAGTTTAATC CATACAGATA CACATTCATC GATAAAGCAA GCACATTCTC ATCATCATCC TCATCTTCAT TTTCATCCAA CGGTCAAGAT TCAGCCTACG ACTACATAGT CATCGGAGGT GGAACCGCAG GGTGTCCTCT CGCCGCAACG CTGTCGCAAA ATTTCAGCGT TCTTGTTTTA GAAAGAGGTG GCGTTCCGTT TACAAACGCA AACGTTTCTT TCCTCAGGAA TTTTCACATC GGACTTGCTG ACACGTCAGC TTCTTCCGCG TCACAAGCGT TTGTTTCCAC TGACGGCGTT TACAACGCTC GTGCTCGAGT TCTCGGTGGC GGTTCCTGTA TTAACGCCGG TTTTTACTCC AGAGCCGATG CTGCGTTCGT GAAGCGGGCA GGATGGGATC CGAAGCTGGT GAAGGAGTCG TATCCATGGG TGGAGCGAGA AATTGTTCAT CAGCCAAAGT TAACGTTATG GCAGAAAGCT CTCAGAGACA GTCTTTTAGA GGTTGGAGTC AGACCTTTCA ATGGCTTCAC TTACGATCAC GTCTCCGGAA CCAAAATCGG CGGCACAATT TTCGACAGAT TCGGCCGTCG TCACACCGCG GCGGAGCTTC TCGCTTACGC TAATCCTCAG AAGCTTAGAG TCTTGATCTA CGCCACTGTG CAAAAAATCG TCTTTGACAC TTCGGGAACA AGGCCTAGAG TAACAGGAGT GATATTTAAA GACGAGAACG GTAATCAACA TCAGGCTTTA CTCTCGAATA GAAAGGGAAG TGAAGTGATC TTATCTAGTG GAGCCATTGG GTCACCACAG ATGCTGATGT TAAGTGGGAT TGGACCTAAG AAGGAGCTTC AGAGGCTGAA GATTCCTGTG GTTTTAGAGA ATGAGCATGT AGGGAAAGGA ATGGCTGATA ATCCCATGAA CACGATCTTG GTACCTTCAA AGGCGCCTAT AGAGCAGTCA CTCATTCAGA CTGTTGGAAT TACAAAGATG GGTGTGTATG TTGAAGCCAG TACTGGCTTT GGGCAATCTC CTGAGAGTAT TCATACTCAC TATGGGATTA TGTCAAACAA GAATGAGTTG TTTTCCACCA TTCCTGCAAA GCAGAGAAGA CCAGAAGCAA CGCAAGCTTA CATCACAAGA AACAAATACC AACTTCACGA AGCATTCAAT GGAAGTTTCA TCTTGGAGAA ACTTGCTTAC CCCATCTCTA GAGGGCATTT GAGCTTGGTC AACACCAATG TAGATGACAA CCCTTCAGTC ACCTTCAATT ACTTCAAACA CCCGGTAGAT CTCCAACGCT GTGTTGAAGC CATTCGTCTG GTTTCCAAAG TGGTGACATC TAAGCGCTTC TTAAACTACA CACAGTGCGA TAAGCAAAAC GTCCACAAGA TGCTTAGCTT AAGTGTTAAG GCAAACATCA ATCTACGGCC AAAGCAACTG AACGATACCA AATCAATGGC TCAGTTCTGC AAAGACACTG TTGTCACAAT CTGGCACTAC CATGGTGGAT GTCTTGTGGG TAAAGTTGTG AGCCCTAACC GCAAAGTTCT TGGTGTCGAC AGGCTGAGAG TTATTGATGG TTCAACCTTT GACGAGTCTC CAGGAACCAA CCCTCAAGCT ACGATGATGA TGATGGGAAG ATACATGGGA GTCAAGATTC TTAGGAAGAG ACTTGGAGAC AAGGCTGGTG TTTAGTTTGC TGAGCTTTTA TCGTA |
| Length | 1835 |
| Protein Sequence | |
| Protein Residue | |
| Map Location | scaffold_2: 14736588.. 14739603 |
| Download Sequence |
|
| A.thaliana |
|---|
| AGI-code | AT1G72970.1 |
| Description | Glucose-methanol-choline (GMC) oxidoreductase family protein |
| TAIR curator summary | Originally identified as a mutation that causes floral organs to fuse together. About 10-20% of mutants also have defects in ovules. Mutants have reduced fertility most likely as because of fusions that pistil emergence. The protein has similarity to the mandelonitrile lyase family of FAD containing oxidoreductases and is predicted to be secreted (SignalP).It is expressed in all tissue layers of roots, inflorescences, stems, leaves, and flowers and is also expressed in siliques. Expression is highest in inflorescence and flower tissue.Transmission of mutant alleles to the progeny shows non mendelian segregation- a percentage of mutant alleles revert back to a previous parental (e.g. grandparental) wild type allele. It has been suggested that an RNA template driven or other extra-DNA genomic mechanism may be responsible for the non-mendelian inheritance of HTH. Reversion events in alleles at other loci have also been observed to occur in plants with an hth mutant background indicating a genome wide effect. |
| Alias | [EDA17][HTH][embryo sac development arrest 17][HOTHEAD] |
| Gene coexpression |
|---|
| MR |
| MR | Locus | Description |
| 2.64575 |
Ahg472662 | MLP-like protein 423 |
| 2.82843 |
Ahg477690 | Li-tolerant lipase 1 |
| 3 |
Ahg927503 | Leucine-rich repeat (LRR) family protein |
| 4 |
Ahg470654 | Fatty acid desaturase family protein |
| 5 |
Ahg487523 | Eukaryotic aspartyl protease family protein |
| 6.9282 |
Ahg492964 | GDSL-like Lipase/Acylhydrolase superfamily protein |
| 8.66025 |
Ahg494701 | Leucine-rich repeat protein kinase family protein |
| 9.16515 |
Ahg945946 | SKU5 similar 4 |
| 10 |
Ahg477440 | serine carboxypeptidase-like 25 |
| 10.4881 |
Ahg494383 | GDSL-like Lipase/Acylhydrolase superfamily protein |
|
| RNA-seq |
|---|
Seasonal expression (July 2011 to June 2013) |
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| The four seasons |
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| Growth Chamber expression |
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