Detail



ID : Ahg470444

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|470444|fgenesh2_kg.1__398__AT1G04610.1
Sequence
ACACACATAC ACTTACATCT CCATCCTCTT GTCCTAAAAA GCTTCCCAAA TCTTTTTTTT TTCTTCTTCT ACAATCTCAA AATTTCTTCT GTTTTCTCCT CACAACCAGA CAAGCAAACT CTAAACTCTG TGGAAGATGT ATGGAAATAA TAACAAGAAG TCTATCAACA TCTCGAGTAT GTTTCAAAAC CTCATCCCCG ACGGCAGCGA CATTTTCTCC CGGCGTTGCA TCTGGGTCAA CGGACCGGTC ATCGTTGGAG CTGGCCCATC AGGTCTAGCC GTTGCTGCGG GATTGAAACG TGAAGGAGTA CCGTTCATAA TCCTCGAGCG AGCTAACTGC ATTGCTTCAT TATGGCAAAA CAGAACCTAC GATCGTCTCA AACTCCATCT CCCTAAACAG TTTTGCCAAT TACCCAATTA TCCTTTCCCG GACGAGTTCC CTGAGTACCC TACCAAGTTT CAGTTTATTC AGTACCTTGA GTCCTACGCA GCCAACTTTG ACATCAACCC TAAGTTCAAC GAGACAGTCC AGTCCGCAAA ATACGACGAG ACGTTCGGGC TGTGGCGGGT TAAGACCATT TCGAAGATGG GTCAGCTCGG TTCTTGCGAG TTTGAGTATA TCTGCAGGTG GATTGTGGTG GCCACGGGAG AGAATGCTGA GAAAGTTGTG CCGGATTTTG AAGGTCTAGA GGATTTTGGC GGCGATGTTC TCCATGCTGG TGACTATAAA TCTGGTGGAA GGTACGAAGG GAAAAAGGTT TTGGTGGTGG GATGTGGAAA CTCCGGTATG GAAGTCTCTC TCGATCTCTA CAATCACGGA GCAAACCCAT CAATGGTCGT TCGTAGCGCT GTGCATGTTT TACCAAGAGA GATTTTTGGG AAATCAACGT TTGAATTAGG AGTTACGATG ATGAAGTATA TGCCAGTTTG GCTCGCGGAC AAGACCATAC TCTTTCTAGC GAGGATGATT TTAGGGAATA CCGATAAATA CGGTCTAAAA AGGCCGAAAA TTGGACCGTT AGAGCTAAAG AACAAGGAAG GGAAAACTCC AGTACTTGAC ATCGGAGCGT TACCCAAAAT CAGATCGGGA AAGATCAAAA TCGTCCCCGG AATCATAAAG TTCGGTGAAG GAAAAGTTGA ACTAGTGGAT GGCCGTGTTC TTGAGATTGA TTCCGTTATT CTAGCTACCG GATACAGAAG CAACGTCCCT TCATGGCTTA AGGACAATGA CTTCTTCTCC GATGATGGGA TACCAAAAAA CCCGTTTCCA AACGGATGGA AAGGAGAGGC GGGATTGTAT GCGGTAGGGT TCACGAGAAA AGGATTGTTT GGTGCGTCGC TTGATGCTAT GAGTGTGGCT CATGATATTG CTAATAGGTG GAAAGAAGAG TCTAAGCAAC AGAAGAAAAC TGCTGCTGCT CGTCATCGTC GATGTATTTC ACATTTCTAA CTATCAAAAT CAAATTTAGG GAAGATAATT AAGCCCTCTC CTCAGAAGAA AAATACCCCA AAAAATAAGA GAATTGTGAA AAGAAAATAA AATTAGGGGG ATTTTTCTTT GTTTTTTAGG AAGATGTGGC TTTTTTATGT AATTTTTATT GTAAGAGTGC TTTTTTTTGT TCTTGTATTT TTTTTTCTAT CTTCATTTTA GATTTTGAAC TCTTGTAAGA AGTTTTGCTT AATCTAATAT GACAAATAT 
Length1699
Protein Sequence
Protein Residue
Map Locationscaffold_1: 1460437.. 1462613
Download Sequence
A.thaliana
AGI-codeAT1G04610.1
DescriptionYUCCA 3
TAIR curator summary
Alias[YUC3][YUCCA 3]
Gene coexpression
MR
MR Locus Description
13.8564 Ahg484851 F-box family protein
28.1603 Ahg478121 Pectin lyase-like superfamily protein
35.609 Ahg892007
58.0172 Ahg317859 Homeodomain-like superfamily protein
59.975 Ahg931324
68.6731 Ahg341831
77.201 Ahg487015 Protein of unknown function (DUF3741)
80.8332 Ahg921240 F-box family protein
86.5043 Ahg337008
88.4025 Ahg338146 KNOX/ELK homeobox transcription factor
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression