| Annotation |
|---|
| Description | jgi|Araly1|470550|fgenesh2_kg.1__504__AT1G05500.1 |
| Sequence |
AGAGATTTCT TAGAAAATAA ATAGATTACT TTGTCTTTTC TCATTCGGGT TAGCTCGCGA AACTGAATCT GGTGTTACGG ACATTGCAAT TTTCGAAATC CGGCGATATA AATGGGTTTC ATAGTCGGCG TTGTGATCGG ACTCGTCGTC GGAGTCGCAA TCATCATCGG CTTTGTCAAG TTGGAGAATT CTCGATCCAA GCTTCGCTCT GAACTTGCGA ATACGGTGGC TGCTTTTGCG AGGATGACGG TGGAGGATTC CAGGAAGCTT TTGCCTCCTG AGTTTTATCC TTCCTGGGTT GTCTTCTCCG AGCGTCAGAA GTTGACTTGG CTCAACCATC ACTTGACAAA GATCTGGCCT TATGTTGATG AGGCAGCCTC TGAGCTTATA AAGGCATCCG TGGAGCCTGT TCTCGAGCAA TATAGACCTG CCATAGTGGC CTCCTTAACG TTTTCTAAGC TTACTCTCGG TACAGTGGCG CCTCAATTTA CAGGTGTTTC CATTATCGAC GGTGATAAAA ATGGGGTGAC CATGGAACTT GATATGCAAT GGGATGGAAA TCCAAATATA GTACTTGGCG TCAAGACCTT AGTTGGTGTA TCTCTCCCAA TTCAGGTGAA AAATATTGGA TTCACTGGTG TTTTCAGGCT GATTTTTAGG CCACTAGTTG AAGACTTTCC TTGCTTTGGA GCTGTCAGCG TTTCTCTTAG AGAAAAGAAA AAATTGGACT TCACCCTTAA GGTTGTTGGA GGTGATATTT CAGCAATTCC TGGACTTTCT GAAGCCATTG AGGAAACAAT TCGGGATGCC GTGGAAGATT CTATCACATG GCCTGTTCGG AAGGTCATCC CAATTATACC TGGTGATTAT AGCGATCTGG AGCTAAAGCC TGTTGGAATG TTGGAGGTGA AGCTTGTGCA AGCAAAGAAC TTGACCAACA AAGATCTAGT TGGAAAATCA GACCCCTTTG CTAAAATGTT TATACGCCCT TTGCGAGAAA AGACTAAAAG AAGCAAGACA ATTAACAATG ACCTGAATCC CATCTGGAAT GAGCATTTTG AATTTGTTGT CGAAGACGCG TCAACTCAAC ATTTAGTGGT CAGAATATAT GATGACGAGG GTGTACAAGC ATCTGAGCTT ATCGGGTGTG CCCAAATCCG GCTTTGTGAA CTCGAACCTG GTAAAGTGAA AGACGTCTGG TTGAAGCTGG TCAAAGATTT GGAGATCCAG AGAGATACCA AGAACCGTGG AGAGGTTCAC CTTGAGCTCC TTTACGTCCC TTATGGTTCG GGAAACGGCA TCGTAAATCC CTTTGTCACT TCATCGATGA CTTCCTTAGA GAGGGTGCTC AAGAATGATA CAACAGATGA AGAAAATGCA TCAAGCCGTA AAAGAAAAGA TGTCATTGTA AGAGGAGTGC TCTCTGTGAC AGTGATATCT GCAGAAGAGA TACCAATACA AGATCTGATG GGGAAAGCTG ATCCATATGT TGTTCTCTCG ATGAAGAAAT CAGGTGCCAA GAGCAAAACT CGGGTCGTCA ATGACAGCTT GAACCCGGTT TGGAACCAGA CTTTTGATTT TGTAGTTGAA GACGGGTTAC ACGATATGCT AGTCCTTGAA GTCTGGGACC ACGACACCTT TGGAAAGGAC TACATTGGCA GATGTATCCT CACGTTGACA AGGGTTATAA TGGAAGAGGA ATACAAAGAC TGGTACCCAT TAGACGAATC CAAAACGGGC AAGCTTCAGT TGCATCTCAA GTGGATGGCT CAATCAATTT ATCGCGATTC CTAAGCTTAA TGGGAAGATT CTCAACTTCT AATGTACATT TTGTCTAGTA GCTTCAAACG GATTTACTTT GTCAAACAGA GAAGAGTCCG CATGTAGCCC AGAAGCTATG GACTCGAATA TGAGTTTTCC TCTTTTTCTG AAAACCCTAG ACAATACTTG TGTAC |
| Length | 1955 |
| Protein Sequence | |
| Protein Residue | |
| Map Location | scaffold_1: 1834621.. 1838807 |
| Download Sequence |
|
| A.thaliana |
|---|
| AGI-code | AT1G05500.1 |
| Description | Calcium-dependent lipid-binding (CaLB domain) family protein |
| TAIR curator summary | Encodes a endomembrane-localized synaptotagmin. Synaptotagmin family proteins are calcium sensors that regulate exocytosis in mammalian cells. |
| Alias | [ATSYTE][NTMC2T2.1][NTMC2TYPE2.1][SYT5][SYTE][ARABIDOPSIS THALIANA SYNAPTOTAGMIN HOMOLOG E][synaptotagmin 5][SYNAPTOTAGMIN HOMOLOG E] |
| Gene coexpression |
|---|
| MR |
| MR | Locus | Description |
| 6.7082 |
Ahg493583 | |
| 6.9282 |
Ahg482130 | DNA topoisomerase, type IA, core |
| 7.54983 |
Ahg947562 | RING/U-box superfamily protein |
| 9.48683 |
Ahg931790 | coatomer gamma-2 subunit, putative / gamma-2 coat protein, putative / gamma-2 COP, putative |
| 16.4317 |
Ahg475037 | GPI transamidase subunit PIG-U |
| 16.9706 |
Ahg493917 | succinate dehydrogenase 2-2 |
| 20.4939 |
Ahg487367 | signal recognition particle binding |
| 26.3249 |
Ahg942897 | mRNAadenosine methylase |
| 30.4467 |
Ahg324617 | embryo defective 1703 |
| 30.6594 |
Ahg924060 | branched-chain alpha-keto acid decarboxylase E1 beta subunit |
|
| RNA-seq |
|---|
Seasonal expression (July 2011 to June 2013) |
|
|
| The four seasons |
|
|
| Growth Chamber expression |
|
|