Detail



ID : Ahg924060

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|924060|scaffold_105341.1
Sequence
TTGTTGGTGG GTTTTGTGTA AATGGCGGCT CTTTTAGGCA GATCCTTCCG GAAACTGAGT TTTCCGAGCT TGAGTCACGG AGCTAGGAGG GTATCGACGG AAACTGGGAA ACCATTGAAT CTATACTCTG CTATTAATCA AGCGCTTCAC ATCGCTTTGG ATACCGATCC TCGGTCTTAT GTGTTTGGGG AAGATGTTGG CTTTGGTGGA GTCTTTCGCT GCACAACTGG TTTAGCTGAA CGATTCGGGA AAAACCGCGT CTTCAATACT CCTCTTTGTG AGCAGGGCAT TGTTGGATTT GGCATTGGTC TAGCAGCAAT GGGAAATCGA GCAATTGTGG AGATTCAGTT TGCGGATTAT ATATATCCTG CTTTTGATCA GATTGTTAAT GAAGCGGCAA AATTCAGATA CCGAAGTGGT AACCAATTCA ACTGTGGAGG ACTTACGATA AGAGCACCAT ATGGAGCAGT TGGTCATGGT GGACATTACC ATTCACAATC CCCTGAAGCT TTCTTTTGCC ATGTTCCTGG TATTAAGGTT GTTATCCCTC GAAGTCCACG AGAAGCAAAG GGACTGTTGT TGTCATGTAT CCGTGATCCA AATCCCGTTG TCTTCTTCGA ACCAAAGTGG CTGTATCGTC AAGCAGTAGA AGAAGTCCCT GAGCATGACT ATATGATACC TTTATCAGAA GCCGAGGTTA TAAGAGAAGG CAATGACATA ACCCTTGTTG GATGGGGAGC TCAGCTTACC ATTATGGAAC AAGCTTGTCT GGACGCAGAA AAGGAAGGAA TATCATGTGA ACTGATAGAT CTCAAGACTT TGCTTCCTTG GGATAAAGAA ACCGTCGAGG CCTCGGTTAA AAAAACTGGA AGACTTCTTA TAAGCCATGA AGCTCCTGTA ACAGGAGGTT TTGGAGCAGA GATCTCTGCA ACAATCCTCG AACGTTGCTT TTTAAAGTTA GAAGCTCCAG TAAGCAGAGT TTGTGGACTG GATACTCCAT TTCCTCTTGT GTTTGAGCCA TTCTACATGC CCACCAGGAA CAAGATATTG GACGCGATCA AATCGACTGT GAATTACTAG CCGTTCTATC TGTTTCTTAG 
Length1100
Protein Sequence
Protein Residue
Map Locationscaffold_1: 27877919.. 27879892
Download Sequence
A.thaliana
AGI-codeAT1G55510.1
Descriptionbranched-chain alpha-keto acid decarboxylase E1 beta subunit
TAIR curator summarybranched-chain alpha-keto acid decarboxylase E1 beta
Alias[BCDH BETA1][branched-chain alpha-keto acid decarboxylase E1 beta subunit]
Gene coexpression
MR
MR Locus Description
2.82843 Ahg491578 UDP-N-acetylglucosamine (UAA) transporter family
14.2478 Ahg472398 wound-responsive family protein
20.199 Ahg475684 AAR2 protein family
22.0227 Ahg324617 embryo defective 1703
25.7876 Ahg476410 Homeodomain-like/winged-helix DNA-binding family protein
30.6594 Ahg470550 Calcium-dependent lipid-binding (CaLB domain) family protein
37.1483 Ahg493633 histidine kinase 2
38.6523 Ahg496218 Homeobox-leucine zipper family protein / lipid-binding START domain-containing protein
43.4166 Ahg927817 exportin 1B
44.1248 Ahg475250 ATP-citrate lyase A-2
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression