Detail



ID : Ahg470760

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|470760|fgenesh2_kg.1__714__AT1G07390.1
Sequence
ATCGGTTTAT TGCAACTCAA GTCGTATCTC AAGAATCTCC TTGACGCTGA AGAAGAAGAA GAAGAAGGAC TTAGTATTCT CAAGTCATGG ACTCATCATA ATGATGATTG TTGCCTCTGG GAGAGAGTAA AGTGTAGTGA CGCTACTAGT GGTCACGTCA TCGATCTCTC ACTGGATAGA CTCATACCGG TCGCATTTGA GTCGCAAATT CGGACTTTAA ACCTGTCTTT GCTTCATAGT TTTCCTCAAC TCCAAAGCCT TAACCTCTCG TGGAATTGGT TTACTAATTT GTCTGATCAC GTCCTTGGTT ATAAGAGCTT TGGGAGACTA GAGAAGCTCA CCACCATAGA TTTCTCCCAC AATATGTTCG ACAACAGTAT TGTTCCTTTC TTAAGTGCTG CGACATCGGT TAGGAATCTA CATCTTGAGT CTAATTACAT GGAAGGTGTC TTTCCTCCTC AAGAACTTGC AAACATGACA AACTTGAGAG TGTTACACTT GAAGGACAAC AGTTTCAGCT TCTTATCTGC TCAAGGTTTA ACCTATTTCA GAGAGTTAGA AGTACTGGAT CTCAGTTTCA ATGGTGTCAA CGTCTCTGAG GCTAGTCACT GGTTTAGTAC GGCGAAACTG AAAACACTAG ATCTTAGTTT CAATCCGTTT TCAGATATTT CTCAACTTAA AGGTTTAGAA AGTCTCCGAG AGTTACTAGT CTTGATATTA CGAGGCAATA AATTCAACCA CACGCTATCT ACTCATGCAC TGAAAGATCT GAAAAAGTTG CAAGAACTGG ATCTCAGTGA CAATGGGTTC ACAAATTTGG ATCTTGGCCG AGAAGTGAGG AGGAGTTTAT TATTAGAGAC GTTGTTCAGC AATCACTTTA CATGCTTATT AGAAGTGGAG CAGTCAAATC TTTATCTATT TATGTATCAT TATGTTCTTT TCAACTGCAG TCTAAATAGT TCATATGATG ATGGAGTTGA TGAATATCTC TATTGTTATT TAGGGATTTG CAGACTAATG AAACTCAGGG AACTGGATTT GAGCAGCAAT GCTTTAACAA GTCTACCTTC TTGTTTGGGT AACTTAACGC ATCTTCGAAC TCTTGATCTA TCGAACAACC AATTGAATGG AAACCTGTCT TCCTTTGTGT CTGGTCTACC AACAGTTCTT GAGTACTTGT CGCTGCTTGA TAATAACTTC AACGGTTCGT TCTTATTCAA CTCACTGGTC AATCAAACAA GACTCACAGT ATTCAAATTG TCATCAAAAG TTGGTGTGAT CCAAGTTCAG ACGGAGAGTT CCTGGGCTCC ATTGTTTCAA TTGAAGATGT TACATTTGTC GAATTGCAAT CTTGGCAGTA CAATGCCTGT CTTTCTCGTG CATCAGCATG ACTTGTGCTT CGTTGATCTC TCTTATAACA AGTTGACAGG AACATTCCCA ACGTGGCTTG TGAAGAATAA CACAAGGCTG CAGACTATTT TACTAAATGG GAACTCATTG ACAAAGCTTC AACTACCTAT GCTTGTTCAC GGCTTGCAAG TTCTCGATAT CTCGAGTAAT ATGATATATG ATTCGATTCA AGAAGACATA GGGATGGTGT TTCCAAACCT GAGGGTTATG AAGCTCTCCA ACAATCAATT ACAGGGGAAA ATATTTCCTA AGCATGCAAA CCTTACTGGT TTAGTAGGGC TTTTTCTTGA TGGCAACAAT TTTACTGGGA GTCTCGGAGA AGGTCTATTG AAGTCAAAGA ATCTAACTCT TTTAGACATA TCAGATAATA GGTTTTCGGG CATGCTTCCG CGTTGGATTG GTAGGATGTC ATGGCTTTCC TACCTATACA TGAGTGGTAA TCAGCTAAAA GGTCCTTTCC CTTTTCAACA ACAGAGTCCT TGGGTTGAGG TTATGGACAT CTCACACAAT AGCTTCTCTG GTTTGATACC AAGGAATGTG AATTTTCCAT CTCTCAGAGA ATTAAGACTA CAAAACAATG AGTTTATGGG TTCAGTTCCG GGCAATTTAT TCAATGCTGC GGGATTAGAA GTGCTTGATT TGCGTAACAA CAACTTTTCT GGAAAGATAC TGAACACTAT TGACCAGACA TCTAAGTTAC GCATTCTTCT TCTACGGAAT AACAGCTTTC GAACTTATAT TCCTGGGAAA ATATGTCAGC TAAGTGAAGT TGGTCTCTTG GACTTGTCTC ACAATCAATT CAGAGGCCCC ATACCATCAT GTTTCAGTAA AATGTCTTTT GGTGCAGAGC AGAATAACGG TACCATGTCA CTTGTTGCAG ATTTTGACTT CTCAGACATT ACATTCTTGC GACATTGTCA TTATGCATCA CATCTTAACT TGGATGATGG TGTCAGGAAT GGTTATCAAC CAAAACCAGC AACCGTAGTG GATTTTTTAA CGAAAAGCAG ATATGAGGCG TATCAAGGTG ATATTCTCCG CTATATGCAT GGTCTGGATT TGTCGAGCAA CGAACTATCG GGTGAAATTC CAATTGAGAT TGGAGATCTT GAGAATATCA GATCCCTGAA TTTGTCAAGC AATCGCCTCA CAGGCTCCAT ACCAGATAGC ATTCAAAAGC TGAAGGGCTT AGAGAGTCTT GATCTATCCA ATAATAAGCT CTATGGAAGC ATCCCTCCTA TGCTAGCCGA TCTCAACAGT TTAGGATACT TTAACATTTC ATATAACAAT TTATCAGGTG AAATCCCTTT CAAAGGCCAT CTTGTAACCT TTGACGAGAG GAGCTACATA GGCAATGCTC ATCTATGTGG ACTTCCTACA AATAAAAATT GCATCTCCCA GAGAGTCCCT GAGCCACCAA GTGTACCAAC GCAGGCCAAA GAGGAAGACA ACGAAGAAGA AGGTGATGTG ATAGACATGG TGTGGTTTTA TTGGACTTGT GTTGCAGTCT ACATAGCTAC ATCCTTGGCC TTGTTTGCTT TCCTCTGCAT AGACACACGA TGGTCCCGAG AATGGTTTTA TCGTGTAGAT CTATGCGTTC ATCATCTCCT ACGGTTCAAG CGTTCCTCTA TCTGCAACTG ATTCCGTGGC TCGCCAAGAG 
Length3070
Protein Sequence
Protein Residue
Map Locationscaffold_1: 2545565.. 2550387
Download Sequence
A.thaliana
AGI-codeAT1G07390.3
Descriptionreceptor like protein 1
TAIR curator summary
Alias[AtRLP1][RLP1][receptor like protein 1]
Gene coexpression
MR
MR Locus Description
21.0713 Ahg352314 Copper amine oxidase family protein
22.2935 Ahg943129 Copper amine oxidase family protein
22.4722 Ahg489687 zinc finger (C2H2 type) family protein
27.3496 Ahg478828 Aldolase-type TIM barrel family protein
28.9482 Ahg472997 evolutionarily conserved C-terminal region 9
35.6371 Ahg474215 Thioredoxin protein with domain of unknown function (DUF1692)
40.7922 Ahg488204 pheophytinase
44.1248 Ahg488679
48.7852 Ahg493378 catalytic LigB subunit of aromatic ring-opening dioxygenase family
54.2679 Ahg491332 metallo-beta-lactamase family protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression