Detail


ID : Ahg478828

Blast(Query):  A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|478828|fgenesh2_kg.3__1529__AT3G14130.1
Sequence
ATTAGATGGA TCAAATCGTT AACGTGGATG AGTTTCAAGA ACTGGCCAAA CAGACCCCCC CTAAAATGTA CTATGATTTC TACAATGGAG GAGCAGAAGA TCAACACACT CTCAAGGAAA ATGTGCTAGC TTTCCGTAGA ATCATATGGA TCAAATCGTT AACGTAGATG AGTTTCAAGA GCTGGCCAAG CAGGCTCTCC CTAAAATGTA CTATGATTTC TACAATGGAG GAGCAGAGGA TCAACACACT CTTAAGGAAA ATGTGCTAGC TTTCCGTCGA ATCATGCTTA GGCCTCGAGT TCTTGTTGAT GTGAGCAAAA TAGATATGTC CACAACCATA TTGGGTTACC CAGTCTCAAG TCCTATCATG ATTGCTCCAA CAGCAATGCA TAAGTTGGCT CATCCTGAAG GAGAAATCGC CACCGCGAAA GCTGCAGCTG CGTGTAACAC TATCATGATA GTATCATTCA TGTCTACTTG CACTATTGAG GAGGTTGTTT CCAGTTGTAA TGCTGTTCGG TTTCTTCAAA TATATGTGTA CAAAAGACGT GATGTAACTG CTCAGATCGT GAAAAAGGCT GAGAAAGCTG GATTCAAGGC CATAGTTCTG ACTGTTGATG TTCCTAGACT TGGTAGAAGG GAAGCTGATA TAAAGAACAA AATGATATCC CCGCAGCTGA AGAACTTTGA AGGTTTAGTT TCAACCGAAG TCCGACCTAA TGAAGGTTCA GGGCTTGAAG CCTTTGCCTC TAGTGCACTT GATGCTTCGT TAAGTTGGAA GGACATCGAA TGGTTAAGAT CTATTACAAA GTTGCCAATT CTGGTCAAAG GGTTACTCAC ACGTGAAGAT GCTCTTAAGG CTGTTGAAAC TGGTGTAGAT GGGATAGTTG TATCTAACCA CGGGGCTCGC CAGCTCGACT ATTCCCCTGC TACAATAACT GTTTTAGAAG AGGTTGTTCA TGTTGTTAGA GGTAGGATTC CGGTCTTGCT TGATGGAGGA GTAAGAAGAG GAACAGATGT TTTCAAAGCG CTGGCGCTTG GAGCACAAGC TGTTCTTATA GGGAGGCCAA TTGTGTATGG GCTTGCAGCA AAGGGTGAAG ATGGAGTGAA AAAAGTGATT GAGATGCTGA AGAATGAGTT AGAGATTACT ATGGCCCTTT CTGGTTGTCC AACCATTGAT GACATAACCA GAAACCATGT TAGGACAGAG AATGAGAGAC TTCGCTCTAT GCTCTGATCC AAAAAAGTAA AACCAACAGA TCTGGTCTCA GAGACTTTAA CAGACAGTTG GACAAGAGTC TGAAATACTG TCACAGCACA TAAATAATAA AGCTCTATTT CAAGACAAGG GATTAGTACG TTTGGACTTT GCGATGTATT TTTTTTCTGC TTGATTTGCT GGTTATAAAC TTATAATAAG CCTATGAGAG AAGCGGTTTT CTGA
Length1444
Protein Sequence
Protein Residue
Map Locationscaffold_3: 5542657.. 5548945
Download Sequence
A.thaliana
AGI-codeAT3G14130.1
DescriptionAldolase-type TIM barrel family protein
TAIR curator summary
Alias[HAOX1]
Gene coexpression
MR
MR Locus Description
2.82843 Ahg480185 Ubiquitin-like superfamily protein
16.5227 Ahg489372
21.4942 Ahg487997
21.8861 Ahg919779 branched-chain amino acid transaminase 2
22.4722 Ahg488853 Protein of unknown function, DUF538
27.3496 Ahg470760 receptor like protein 1
28.1425 Ahg947442 calmodulin 1
30.0998 Ahg934176
31.749 Ahg334627 allene oxide cyclase 4
35.4119 Ahg493125 ubiquitin C-terminal hydrolase 3
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression