Detail



ID : Ahg470794

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|470794|fgenesh2_kg.1__748__AT1G07810.1
Sequence
ATGGGGAAAG GAGGTGAAGA TTGCGGGAAT AAGCAAACGA ATAGTTCTGA TACGTTTGCT GCTTGGGCTA AAGATGTTGC GGAATGTGAG GAGAAGTTTG GTGTTAGTCG TGAGAAAGGG TTGGGTACTG ATGAGGTGTT GAAGCGGCAT CAGATCTATG GTTTGAATGA GTTAGAAAAG CCCGAGGGAA CTTCTATCTT TAAGTTGATT TTGGAGCAGT TTAATGATAC ATTGGTTCGT ATTCTTTTGG CGGCTGCTGT TATTTCCTTT GTCTTGGCCT TCTTTGATGG CGACGAAGGT GGTGAGATGG GTATCACCGC ATTTGTTGAG CCGCTTGTTA TTTTTCTCAT CTTGATTGTT AATGCCATTG TTGGGATCTG GCAAGAAACT AATGCTGAGA AGGCATTGGA AGCTTTGAAG GAGATTCAGT CTCAGCAAGC GACTGTCATG CGTGATGGGA CTAAGGTTTC CAGTTTGCCT GCAAAGGAGC TTGTTCCTGG TGACATTGTG GAACTGAGGG TTGGTGATAA GGTACCTGCT GATATGCGTG TGGTTGCTTT GATCAGCTCA ACCCTGAGAC TCGAGCAGGG CTCCTTGACA GGAGAGAGTG AGGCAGTGAG CAAAACCACC AAGCATGTGG ATGAGAATGC CGATATTCAA GGAAAGAAAT GCATGGTATT TGCAGGAACC ACTGTTGTGA ATGGGAACTG TATATGCTTA GTTACAGATA CTGGGATGAA TACTGAGATT GGAAGGGTTC ACTCACAGAT CCAGGAAGCT GCACAACACG AGGAAGATAC CCCTCTGAAG AAAAAACTTA ACGAGTTTGG GGAAGTTCTG ACTATGATCA TTGGGTTAAT TTGCGCGTTA GTGTGGCTCA TCAATGTCAA ATACTTTCTG TCATGGGAGT ATGTTGATGG CTGGCCCAGA AACTTTAAGT TCTCCTTCGA GAAGTGCACA TACTACTTTG AGATTGCTGT TGCATTGGCG GTTGCTGCAA TTCCTGAAGG TCTGCCAGCA GTTATTACCA CATGTTTGGC TCTTGGCACT AGGAAGATGG CTCAGAAGAA TGCTCTGGTT AGGAAGCTAC CCAGTGTGGA GACTCTTGGA TGCACCACCG TGATATGCTC TGACAAAACT GGAACTCTTA CAACCAATCA GATGGCTGTT TCAAAGCTTG TTGCTATGGG TTCTAGGATT GGAACCCTTC GATCTTTCAA TGTTGAGGGG ACCTCGTTTG ATCCTCGAGA TGGGAAGATT GAAGATTGGC CAACAGGTCG GATGGATGCA AATCTTCAGA TGATTGCCAA AATTGCTGCC ATTTGCAACG ATGCTAGTGT TGAGCAATCA GAGCAGCAAT TTGTGTCTAG GGGAATGCCT ACTGAGGCAG CTTTGAAGGT TTTGGTTGAG AAAATGGGAT TCCCCCAAGG ATTGAATGAA GCTTCATCCG ATGGCGATGT CTTACGTTGT TGTCGGCTGT GGAGTGAACT AGAGCAACGA ATTGCCACCC TTGAGTTCGA CCGTGACCGG AAATCAATGG GAGTTATGGT GGATTCGAGC TCAGGAAAGA AGCTGCTACT GGTCAAGGGT GCGGTAGAAA ATGTATTGGA AAGGAGTACA CATATTCAGC TACTTGATGG TTCCATTCGA GAGCTTGACC AATACTCAAG GGATCTTATT TTACAAAGCC TACATGATAT GTCCTTGAGT GCTTTAAGAT GTCTCGGATT TGCATACTCA GATGTTCCAT CAGATTTTGC CACTTATGAC GGCAGTGAAG ACCACCCTGC TCATCAGCAA CTTCTCAACC CATCCAATTA TTCATCAATT GAGTCCAATC TAGTATTCGC TGGATTTGTT GGTTTAAGGG ATCCTCCAAG GAAAGAGGTG CGTCAAGCCA TTGCAGACTG CAGAACAGCA GGTATTCGGG TCATAGTTAT CACCGGAGAC AACAAGAGCA CAGCGGAAGC GATCTGCCGT GAAATTGGCG TATTTGAAGC AGATGAAGAT ATCTCCTCGA GAAGCTTGAC AGGAAAAGAA TTTATGGATG TCCAAGATCA GAAGAATCAT CTAAGACAGA CTGGAGGGCT CTTGTTCTCA AGGGCTGAAC CAAAACACAA ACAAGAGATT GTCAGGTTAC TTAAAGAAGA TGGAGAAGTG GTTGCCATGA CTGGAGATGG AGTTAATGAT GCTCCTGCTT TGAAGTTGGC TGATATTGGT GTGGCAATGG GCATTTCCGG TACAGAGGTA GCAAAGGAGG CATCTGACAT GGTGTTGGCA GATGATAATT TCAGCACTAT TGTTGCAGCT GTTGGTGAAG GCAGGTCCAT CTATAATAAC ATGAAGGCCT TCATCAGGTA CATGATCTCT TCCAACATCG GTGAGGTTGC ATCGATATTC TTGACAGCTG CTCTTGGAAT CCCAGAAGGC ATGATCCCGG TTCAGCTTCT GTGGGTGAAT CTTGTAACAG ACGGTCCTCC AGCTACGGCT CTGGGATTCA ATCCCCCTGA CAAGGACATC ATGAAGAAGC CTCCTCGTAG GAGTGATGAC TCTCTTATCA CTGCCTGGAT TCTCTTCCGC TACATGGTGA TTGGTATGTA TGTGGGAGTA GCAACGGTGG GAGTATTCAT TATATGGTAC ACACACAACA GCTTCATGGG CATAGACTTG AGCCAAGACG GTCACAGCCT TGTGAGCTAT TCGCAGCTCG CACATTGGGG CCAGTGCTCT TCATGGGAAG GCTTCAAAGT GTCTCCTTTC ACGGCAGGCT CTCAGACTTT CTCATTCGAC TCAAACCCTT GCGACTATTT CCAGCAGGGG AAAATCAAGG CATCGACACT CTCCCTCTCG GTGTTGGTGG CCATTGAAAT GTTCAACTCT CTGAATGCAC TCTCAGAAGA TGGCAGCCTG GTGACGATGC CACCATGGGT GAATCCGTGG CTGCTCCTTG CAATGGCGGT CTCATTTGGG CTCCACTTTG TGATATTGTA CGTCCCATTC TTGGCTCAAG TGTTTGGTAT TGTGCCGCTG AGCTTGAACG AATGGCTGCT AGTGCTGGCT GTGTCTCTAC CGGTGATTTT GATAGATGAA GTGCTCAAGT TTGTAGGAAG GTGCACCAGT GGCTACCGCT ACTCACCCCG CACTCGCTCC GCTAAGCAAA AGGAGGAGTA AGAAAATAAT TCAAAAGGCA TTATTATTAG ACTGTTAGTT TTAGCTGAAA TTAACTTTGT TGCTT 
Length3235
Protein Sequence
Protein Residue
Map Locationscaffold_1: 2653957.. 2657900
Download Sequence
A.thaliana
AGI-codeAT1G07670.1
Descriptionendomembrane-type CA-ATPase 4
TAIR curator summary
Alias[ATECA4][ECA4][endomembrane-type CA-ATPase 4]
Gene coexpression
MR
MR Locus Description
2.64575 Ahg496509 Zinc finger C-x8-C-x5-C-x3-H type family protein
3.16228 Ahg356659 aminophospholipid ATPase 2
5.19615 Ahg918742 transcription regulators
6.16441 Ahg490848 heptahelical protein 4
9.48683 Ahg921760 Protein of unknown function (DUF1664)
9.79796 Ahg472173 3-ketoacyl-CoA synthase 4
12.9615 Ahg475221 plus-3 domain-containing protein
13.784 Ahg479256 Protein kinase superfamily protein
14.8324 Ahg486829 homocysteine methyltransferase 2
22.8473 Ahg934288 Pyruvate kinase family protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression