| Annotation |
|---|
| Description | jgi|Araly1|475221|fgenesh2_kg.2__351__AT1G61040.1 |
| Sequence |
TTCATCATCA GCTTCCTCTC GACAATTCGA CATTACTCGT TCCTTTCCTT CTCCTCCTTT AGCCGCCCGC CGTCGATCTC TGCAACACTT TCCGGCGATT TCTCCATCTC ATCTCAAGTG ATAGTGAGAA CCATTTAAAT TCGTTCGTTT GTGAGCTTCC TTTGATGCTA TGGGTGATTT AGAGAATTTG CTTTTGGAAG CTGCTGGGAG AACAAATTCA GCAGGGAGGA GTCGCCATCC TCCATCATCG AGGAGACGTG AGGGTTCTTA CTCTGATGGT AGTAGCGATT CAAGGGATGA TTCTGATGAA GATCGCGGCT ATGCTAGTAG GAAACCGTCT GGGTCTCAAG TTCCTTTGAA GAAGAGATTG GAGGCAGAGA GAGAAGATCG AGCCGCTCGA GTTGAAGGTG GTTATGGTGA TGGACCATCT GATCGTGAAG GTGACAGCAG CGAGGAGTCT GATTTTGGGG ATGACCTTTA CAAGAATGAG GAAGACCGGC AGAAGCTTGC TGGAATGACT GAGTTTCAGA GAGAGATGAT TCTGGCTGAA CGTGCTGATA AGAAAGGTGA TAAGAACTTC ACTGAGAAAC TTAGATCGAA GAGAGAAAAT GAGAAAACCC CTGTTTCTAA AAAGGAGACC CAGCCTCTTC CGGCCTCTCG TGGTGTGCGT TCATCTGCTA GATCTGCAGA CAGAGCCACT GCTAAGGATG ATGCCCTGAA CGAATTGAGG GCAAAGCGTA TGAAGCAGCA GGACCCAGCG GCTCTCAGGA AACTGAGAGA TGCATCAAAA GGTGGTTCAG GTAGTCGAGA TTTCTCATCA ATGAAGAGGA AACCGTTAGC TTCCTCCAAT TTGAGTAGCT CCAGCCAAAG TGACAGTGAT AGTAGGTCTC AGAGTGATGA TGAAGGCTCG AATGCAGGAA TGCTAGACAG TGATGATGAC AGGTCAGATG TGCCTACGTT TGAGGATGTT AAGGAAATTA CCATCAGACG GTCTAAGCTT GCCAAATGGC TAATGGAGCC TTTCTTTGAA GAGCTTATAG TTGGGTGCTT TGTGAGGGTT GGGATCGGAA GGTCAAAGAG TGGTCCAATT TACAGACTCT GCTGGGTGAA GAATGTAGAT GCAACCGATC CAGACAAGAC TTACAAGCTA GAGAATAAAA CTACACACAA GTACCTTAAC GTCGTCTGGG GAAATGAAAC CTCGGCGGCT CGATGGCAAA TGGCTATGAT CTCAGATGGT CATCCGCTGG AGGAAGAGTA TAGGCAATGG ATCAGAGAGG TTGAGCGAAC AAATGGTCGC ATGCCCACAA AGCAAGATAT ATCGGAGAAG AAAGAAGCGA TCCAAAGAAT AAACAGTTTC GTTTACTCTG CGGAAACTGT CAAACAGATG TTGCAGGAGA AAAAATCCGC CTCGGTCAGG CCAATGAATG TTGCGGCCGA GAAAGATCGT CTTAGAAAAG AGTTGGAAAT TGCGCAGAGC AAAAACGATG AAGCAGGTGT AGAGAGGATC AAAACTAAAA TCAAACAGCT CGACGCTTCA CGGAACAAGA AAGGGGTAGA TAAGAAAGCG CTTAAACTTG CCGAGATGAA CAAGAAGAAC AGAGCCGAGA ATTTCAAGAA CGCATCTGAG GTAAAATCAA TAAGCGCTAG TCTCAAAGCC GGTGAAGCTG GGTATGATCC GTTTTCAAGG AGATGGACCC GATCATCGAA CTACTACAAC GGGAAAAACA AGGGGAAAGA CGGAGAAGAG AACGAGACAG CGGTTGCAGC AGCAGTTGAG ACCAATGGCG CAGATGCAGG AGCAGGTGTT GAAGCGACAG AAGCAGCTTT AGAAGCAGCT GCAGAGGCAG GAAAGCTAAT AGACACAAGA GCTCCAATCG GTCAAGGAGC AGAACACAAC CAGCTTCATA ACTTTGAATT GTCGTTATCC CTAACGGCGT TACAGAAGTA CGGAGGACCT CAAGGAGTAC AGAAAGCATT CATGGCGAGG AAGCAAGTGA CCGAAGCAAC AGTGGGATGC AGAGTCGCAG AGAACGATGG CAAGAGACAT GGCCTTACTT TAACTGTTAG TGATTACAAG AGAAGGAGAG GTCTTCTCTG ATTTCTGGAT TTTTTTCAAG TCTCAGTGTT TCATTATCTT CTCAAAACTA CTTCTTGGTT CTTCTTCTCT TCACATTTTT CTTTTGTACT CTCAAAATGT TTAGATCAAT TTGTTTTTTT TTTTTCTTGA AATATTTCTG TACTCGTTTT TGTGTGAATT CTCCTGATTA GTGTATGACT ACATGAAATT AGAAAATTAA ATCTTT |
| Length | 2306 |
| Protein Sequence | |
| Protein Residue | |
| Map Location | scaffold_2: 2566522.. 2569315 |
| Download Sequence |
|
| A.thaliana |
|---|
| AGI-code | AT1G61040.1 |
| Description | plus-3 domain-containing protein |
| TAIR curator summary | Encodes a yeast Paf1C subunit homolog required for the expression of the MADS box gene FLC and other members of the FLC/MAF MADS-box gene family. |
| Alias | [VIP5][vernalization independence 5] |
| Gene coexpression |
|---|
| MR |
| MR | Locus | Description |
| 6 |
Ahg484055 | NHL domain-containing protein |
| 7.74597 |
Ahg479648 | dentin sialophosphoprotein-related |
| 9.59166 |
Ahg484186 | protein kinase 2B |
| 10.8628 |
Ahg479255 | |
| 11.9583 |
Ahg923879 | tubby like protein 7 |
| 12.53 |
Ahg488386 | U-box domain-containing protein |
| 12.9615 |
Ahg470794 | endomembrane-type CA-ATPase 4 |
| 13.5647 |
Ahg480624 | ARID/BRIGHT DNA-binding domain-containing protein |
| 14.6629 |
Ahg475671 | Peptidase C12, ubiquitin carboxyl-terminal hydrolase 1 |
| 16.3095 |
Ahg496743 | ENTH/VHS family protein |
|
| RNA-seq |
|---|
Seasonal expression (July 2011 to June 2013) |
|
|
| The four seasons |
|
|
| Growth Chamber expression |
|
|