Detail



ID : Ahg470882

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|470882|fgenesh2_kg.1__836__AT1G08210.1
Sequence
ATATTATCAG AACGTTTCAG TTGGCGGCTT TCTCTCTCTC TTTCCCCAGG AAGAGAAAGT TCGAACTCGA GAAATGGCGG TGGATTCTCC TGCTGGAGTT ATCATCATCG CCACCGTGCT TTTACATGCT GTGACAACCT TGGTCTGCGG CTCCGACGCG GTTCTCAAGC TGGAGAGATT GATTCCGCCG AACCATGAAC TTGGTCTGAC TGAGCTCAGG GCTTTTGATT CAGCTCGCCA TGGAAGGTTA TTGCAGTCTC CTGTCGGCGG TGTTGTTAAT TTCCCGGTTG ATGGAGCCTC CGATCCGTTT CTCGTTGGGC TTTACTACAC AAAGGTTAAA CTTGGGACAC CCCCTAGAGA ATTTAATGTG CAAATTGATA CTGGAAGTGA TGTTTTATGG GTTAGCTGCA CTTCCTGCAA TGGCTGCCCC AAGACTAGTG AACTCCAAAT TCAACTAAGT TTCTTTGATC CTGGAGTGTC ATCCTCGGCT TCATTAGTTT CATGTTCAGA CAGGAGATGT TACTCAAATT TCCAGACAGA GTCGGGCTGT TCTCCCAACA ATCTTTGTTC CTATTCGTTT AAGTATGGTG ATGGAAGTGG CACTTCTGGT TTCTACATCT CAGATTTCAT GTCCTTTGAT ACTGTTATTA CCAGTACCTT GGCTATAAAT TCCTCTGCTC CCTTTGTCTT CGGGTGTAGC AATTTACAAA CCGGTGATTT ACAGAGACCT AGAAGAGCAG TAGATGGCAT CTTTGGGTTA GGACAAGGGA GTTTATCTGT AATTTCACAG CTTGCTGTGC AAGGACTTGC GCCACGAGTA TTCTCGCACT GTCTGAAGGG AGATAAAAGC GGTGGAGGTA TAATGGTTCT AGGTCAAATT AAGAGGCCAG ATACCGTGTA TACCCCTCTC GTTCCATCAC AGCCACATTA TAATGTGAAC CTGCAGAGCA TTGCTGTGAA CGGTCAGATA TTACCGATTG ATCCATCTGT TTTCACAATA GCCACTGGTG ATGGAACGAT AATTGATACG GGGACGACTC TTGCTTATCT TCCCGACGAA GCTTATAGTC CATTCATCCA AGCTATTGCA AATGCTGTTT CGCAGTACGG GCGTCCCATT ACTTATGAGA GTTACCAGTG CTTTGATATC ACAGCTGGTG ACGTTGATGT CTTTCCCGAA GTGAGTTTGA GCTTTGCTGG TGGTGCATCA ATGGTCTTAA GACCCCGTGC GTATCTTCAG ATTTTTTCTA GTTCAGGAAG TTCAATATGG TGCATTGGTT TCCAGAGAAT GTCACATCGT CGCATAACAA TTCTTGGCGA TTTGGTTCTT AAAGACAAAG TTGTCGTCTA CGATCTTGTT CGCCAGCGTA TTGGATGGGC AGAATACGAC TGTTCTCTGG AGGTGAACGT TTCAGCATCA AGAGGAGGAC GAAGCAAAGA CGTTATAAAC ACAGGACAAT GGAGAGAGAG CGGTTCAGAG AGTTTCAATA GAAGTTATTA TTACTTGTTA CAACAACTAG TCTTCCTCCT CCATCTTTTT GCTCGCTTTT TGTAGCTTCT AGCATTCACT CCACCACCTA TTATGGTTGG ACTTTTGTAA GCTTATTATT GTAATTTAAT CATACTAATT AATTCTTACT TACCA 
Length1645
Protein Sequence
Protein Residue
Map Locationscaffold_1: 2916595.. 2919999
Download Sequence
A.thaliana
AGI-codeAT1G08210.1
DescriptionEukaryotic aspartyl protease family protein
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
27.1662 Ahg474507 STRUBBELIG-receptor family 6
35.0999 Ahg918479 SKU5 similar 17
51.4684 Ahg929096 Protein of Unknown Function (DUF239)
52.2111 Ahg488376 Pentatricopeptide repeat (PPR) superfamily protein
59.0339 Ahg489716 Phosphate-responsive 1 family protein
70.9507 Ahg335224 Pentatricopeptide repeat (PPR-like) superfamily protein
75.4718 Ahg945085 O-Glycosyl hydrolases family 17 protein
84.9117 Ahg491940 Glycosyl hydrolase superfamily protein
98.0714 Ahg496254 Replication factor-A protein 1-related
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression