Detail



ID : Ahg471112

Blast(Query) A.halleri   /   A.thaliana (NOT RECIPROCAL)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|471112|fgenesh2_kg.1__1066__AT1G10010.1
Sequence
ATGGAAGCAT ACCACAATCC TTCGGCGGTG GAGTCGGGTG ACACCGCCGT GAAAGGCGTC GACGACGATG GTCGAGAGAA GAGAACGGGG ACGTTTATGA CGGCGAGTGC GCACATAATC ACGGCGGTGA TAGGCTCCGG GGTGCTGTCG TTGGCTTGGG CTTTAGCACA GCTTGGTTGG GTGGCAGGAA CCATAATTTT GGTCGCTTTC GCCATCATTA CTTACTACAC CTCCACCATG CTCGCCGACT GTTACCGTTC GCCGGACCCC ATCAACGGAA CACGCAACTA TAATTACATG GGCGTCGTCC GAACTTACCT TGGGGGTAAA AAGGTTCAGC TATGTGGACT GGCACAGTAC GTGAATCTCG TAGGGGTCAC TATTGGTTAC ACCATCACTG CCTCCATAAG CTTAGTAGCG ATTGGGAAAT CAAATTGTTA TCATGACAAG GGACATAAAG CGAAATGTTC TGTATCGAAT TATCCGTACA TGGCGGCATT TGGGATCATC CAGATTATTC TGAGCCAGCT TCCTAATTTT CACAAGCTCT CTTTCCTCTC CATCATCGCC GCGGTTATGT CCTTCTCTTA TGCGTCTATT GGAATAGGCC TAGCCATCGC CACTGTAGCA AGTGGGAAGA TTGGTAAGAC AGAATTGACA GGCACAGTGA TAGGTGTGGA CGTAACTGCG TCTGAAAAAG TTTGGAAATT GTTTCAAGCG ATTGGAGACA TTGCCTTTTC ATATGCTTTT ACCACTATTC TCATCGAGAT TCAGGCATAC CACTTCTATT ATCACTTTCT TCAAAGAGAG GACACATTGA GATCAAGCCC ACCAGAGAAC AAAGTGATGA AACGAGCGAG TCTTGCCGGG GTCTCAACCA CAACTGTTTT CTACATCTTG TGTGGTTGCA TCGGATATGC TGCATTCGGG AACCAAGCCC CTGGTGACTT CCTTACTGAT TTTGGTTTTT ACGAACCTTA TTGGCTCGTC GACTTTGCCA ATGCTTGCAT TGCTCTCCAT CTTATCGGTG CCTATCAGGT GTACGCGCAG CCGTTTTTCC AGTTTGTTGA GGAGAACTGC AACAAAAAAT GGCCTCAAAG CAATTTCATC AACAAAGAAT ACTCGTCAAA CATACCTTTG CTTGGAAAAT GTCGTGTCAA CCTCTTCAGA CTGGTTTGGA GAACATGCTA TGTGGTTTTG ACAACATTTG TAGCAATGAT ATTCCCCTTC TTCAATGCGA TCTTGGGTTT GCTTGGGGCA CTCGCGTTCT GGCCACTCAC AGTTTATTTT CCGGTGGCAA TGCACATTGC GCAGGCAAAG GTCAAGAAGT ATTCTCGTAG ATGGTTGGCC TTGAACCTCC TCGTATTGGT TTGCTTGATC GTCTCAATCC TTGCCGCGGT AGGATCCATC ATTGGCTTAA TAAATAGTGT CAAGTCATAC AAGCCCTTCA AGAATTTAGA CTAG 
Length1464
Protein Sequence
Protein Residue
Map Locationscaffold_1: 3680326.. 3683254
Download Sequence
A.thaliana
AGI-codeAT1G10010.1
Descriptionamino acid permease 8
TAIR curator summaryEncodes a high affinity amino acid transporter that is probably responsible for import of organic nitrogen into developing seeds. One of eight gene family members that encode amino acid permeases. Most closely related to AAP1 (75%) identity.
Alias[AAP8][ATAAP8][amino acid permease 8]
Gene coexpression
MR
MR Locus Description
13.8564 Ahg314515 RNA-binding (RRM/RBD/RNP motifs) family protein
22.8473 Ahg490740 Protein of unknown function, DUF617
24.0832 Ahg946730
39.3954 Ahg899865 flavonol synthase 5
40.2989 Ahg891726 Pectin lyase-like superfamily protein
48.9081 Ahg927566 cytochrome P450, family 94, subfamily B, polypeptide 2
55.6327 Ahg936039
59.127 Ahg945048
60.6135 Ahg905626 Uncharacterised conserved protein UCP015417, vWA
66.9029 Ahg916047
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression