Detail



ID : Ahg905626

Blast(Query) A.halleri   /   A.thaliana (NOT RECIPROCAL)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|905626|Al_scaffold_0003_2754
Sequence
ATGGCTTCTT CGTTGCTTGG TCCACCCGAA ATCCGAGACT CTTGCGCTCC CCTCACAAAA CCCATCCCAA AATCCCTCAC GAAACCCATC ACAGCTTCTG GTCCCAGCAA TCCAGTCACG GAGACAAAGG TCTCAAACGT CAACACTTCG CCTCCGACGG GACAGACCGA GGAAAGACCC CCCACGTACC TCGCCGCTCT CCTCAAAAAC ATCAACACTT GTCGTCCCAG CGTCCCAAAG GTCTCAAACG TCAGGAAATC AACTAAAGTC AACGTCAAAC CTGTCAAACC TGTAAGACCG CGAAAAGTTG ATCCATATAA ATCTTCACGT CCGATGGGCT ACAGCGAGAA TGGATCCGCC ACGTACCTCT CCTCAGGCAA CCCCTGCCTC GACTTCTTCT TTCACATTGT TCCTTCAACG CCAAAGTTAT CTCTAGAGCA GCGGCTACAG GAGGCTTGGG ACCATGATGC CTTAACCACT CTCAAGCTTA TCTGTAACCT TCGTGGAGTC CGAGGCACTG GAAAATCTGA CAAGGAAGGG TTTTACACGG CGGCGTTGTG GCTCCATGGT CACCATCCGA AAACCCTAGC TAGTAACCTC GAGTCCATCT CCAAGTTTGG CTATTTTAAA GATTTTCCGG AGATTCTTTA CCGGATTCTA CAAGGATCTG AAATCCGCAG TATCCAGAAA TCGGAATGGT ACAAGACAAT AGCCGCAGCA ATTCTTCGTA GAAGATCCAA ATTCTCCAGA CGCGGTCGTG GTGTTGGCCG TGGTTTTGGT CTTGGTCATG GAAGGGGTCG CAGAATGCGT GGTCTAAAAA GGCCGGCAGC CACGAGGTCT CTGAGGGTAG CGAACGCAAA GAGAAAGGAC CAAGAGGAGA AAGCCAAAGC AAGCTTGGAG CGCAAGCAAA AGAAGGTTTC AATGGGTAAG GCCGCATTTA CAAGATATAC TAACGATCCA GACTATAGGT TTCTCCACGA ACGTGTCTCT GATCTATTCG CAAATCAGCT AAGGAGAGAC CTTGAGTTTT TAAAATCACG CCAACCAAAA CAAATCTCTT TAGCGGCTAA ATGGTGTCCC TCGCTTGATT CTTCGTTCGA CAAAGCAACT CTTCTTTGCG AGAGTATTGC TAGGAAGATC TTTCCCAAAG AATCATTCCC GGAATACGAA GGCGTGGAAG AAGCTCACTA TGCGTACAGA GTTCGTGATC GGCTAAGGAA ACAAGTTCTT GTTCCCCTTC GGAGAACCCT GCAACTCCCT GAAGTATACA TGGGAGCTAG AGCTTGGCGA TTTCTCCCTT ACAATCGTGT TCCATCAGTG GCAATGGCGT CCTATAAGGA GATTTTCTTG TACCGTGACG CAGAGAGGTT TCAACAATAT CTTAACGATG CGAAGACGGG GAAAACGAAG ATAGCCGCCG GTGCAGTGCT ACCTCACGAG ATAATAAAAA ATTTAGACGG TGGAGACGGT GGACAAGTTG CTGAGCTACA ATGGAAACGA ATGGTTGATG ACCTTAAAGA GAAAGGTTCT TTGACCAACT GCATGGCTAT CTGTGACGTT TCGGGGTCTA TGAGTGGTGA GCCAATGGAG GTTTCAGTCG CGCTTGGTTT GTTAGTCTCT GAGCTATCAG AAGAGCCATG GAAAGGAAAG CTTATAACAT TCAGCAAAGA CCCTGAACTG CATTTGGTGA AAGGAGACGA TTTGAGATCA AAAACAAGTT TCGTGAAGAG AATGCAATGG GATATGAACA CTGATTTTCA GAAAGTGTTT GATTTGATTC TTAAAGTGGC CGTAGAAGCC AAGCTGAAGC CGGAAGAGAT GATCAAGACG TTGTTTGTGT TCAGTGATAT GGAGTTTGAT GAAGCGTCGT ATCCAAGTAA TGATGGATGG GATACGCCAT CAGAGAAAGG GTACGGAGAA GCTGTGCCGG AGATTGTGTT TTGGAACCTG AGGGCTTCGA GGTCAACGCC TGTGCTTGGA AACAAGAAAG GAGTGGCTTT GTTAAGTGGG TTTTCGAAGA ACTTGATCAA AGTGTTTTTA AAACACGGTG GAGAGATTGA TGAGGGAAAG ATTGAAGATG GAAAGATTGA TCCCATAACG ATCATGGAGG CTGTTATATC TAGAGATGAG TATAAGTCAC TTGTTGTAAT TGATTGA 
Length2157
Protein Sequence
Protein Residue
Map Locationscaffold_3: 11482421.. 11496122
Download Sequence
A.thaliana
AGI-codeAT3G24780.1
DescriptionUncharacterised conserved protein UCP015417, vWA
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
13.7113 Ahg316907
30.2985 Ahg337885
30.3315 Ahg474922 Protein kinase family protein
34.6987 Ahg312221 Pectin lyase-like superfamily protein
36.5787 Ahg483920 Signal transduction histidine kinase
37.5233 Ahg934805 Stress induced protein
37.9473 Ahg931060
39.2938 Ahg351609 Protein of Unknown Function (DUF239)
53.1695 Ahg481940 VACUOLAR SORTING RECEPTOR 2
59.3296 Ahg321478 Fatty acid hydroxylase superfamily
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression