Detail



ID : Ahg471301

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|471301|fgenesh2_kg.1__1255__AT1G11650.2
Sequence
AACAATCTCT CCTCTTTAGC TTTGTTTTGT TATCTTCTTC TTCATCACAA TTTTTCTACG GTCAGAGATT CAAAGAGTTT CTCTATCTTC TTCTTATTCT CCGATCATCA TGATGCAGCA GCCACCACCC GGAGGTATCC TTCCACATCA CATTCCTCCT CCTTCTGGGC AACAACAGTA CGGTTACCAA CAACCTTCTC CTTACGGGAT TGCTGGTGCT GCTCCACCAC CACCACAGAT GTGGAATCCT CAAGCGGCGG CGCCGCCATC AGCTCAGCCT ACGACTGCCG ACGAGATCCG GACTCTTTGG ATCGGGGACT TACAGTATTG GATGGATGAG AATTTCCTCT ACGGTTGCTT TGCTCATACC GGAGAAATGG TTTCTGCTAA AGTAATTCGT AACAAGCAAA CCGGTCAAGT TGAAGGATAC GGTTTCATTG AGTTCGCATC TCATGCTGCT GCTGAAAGAG TTCTACAAAC ATTCAACAAC GCTCCTATCC CGAGCTTTCC TGATCAGCTC TTTAGATTGA ACTGGGCGTC ATTGAGTTCA GGAGATAAAC GAGATGATTC ACCGGACTAC ACGATATTTG TCGGTGATCT GGCTGCTGAT GTTACGGATT ATATCTTACT TGAGACGTTC AGAGCCTCTT ATCCGTCAGT GAAGGGTGCA AAGGTTGTTA TTGACAGAGC TACTGGGCGT ACAAAGGGAT ATGGTTTTGT TAGGTTTTCT GATGAGAGTG AACAGATTCG TGCTATGACG GAGATGAATG GTGTTCCTTG TTCTACTAGA CCTATGAGAA TTGGTCCAGC TGCTAGCAAA AAAGGTGTTA CTGGTCAGAG AGATTCATAC CAGAGCTCTG CTGCAGGGGC ACCAACTGAT AATGATCCAA ATAACACAAC TGTTTTTGTT GGTGGATTAG ATCAATCTGT CACGGATGAT CATCTGAAGA ATGTCTTTGG CCAATATGGT GAGATTGTGC ATGTGAAAAT ACCCGCCGGA AAGCGCTGTG GATTCGTTCA ATTTTCTGAG AAAAGCTGTG CAGAGGAAGC TCTTAGAATG CTGAATGGAG TGCAATTGGG CGGAACAACC GTCAGGCTCT CATGGGGCCG AAGTCCTTCG AACAAACAGT CAGCGGATCC CAGCCAGTTT TATTACGGCG GGTATGGACA AGGACAGGAG CAGTATGGGT ACACGATGCC ACAAGACCCT AATGCATATT ACGGAGGCTA CTCTGGTGGA GGAGGATACA GTGGTGGTTA CCAGCAGACA CCACAAGCAG GACAGCAACC ACCACAACAG CCACCACAGC AGCAACAAGT CGGGTTTAGC TACTAACTCC GAGAGTATTT CTTGGGTTAA TGTCACTCTG CTTGTTGTTT GCGTACTTTG TTATGAACTT GTTTCTGCGT GCTTTGATAT TTGTCTTTGT TTTCTCTAGG TGTGTTGAAT TTTTCACTCA TAATAATGTT TCTGCGATGC TTCTGTTTTA AATGTTTTCA TCACCTTTTG AAAGAACGTA AGCGTTGATT AT 
Length1532
Protein Sequence
Protein Residue
Map Locationscaffold_1: 4463890.. 4467302
Download Sequence
A.thaliana
AGI-codeAT1G11650.2
DescriptionRNA-binding (RRM/RBD/RNP motifs) family protein
TAIR curator summary
Alias[ATRBP45B][RBP45B]
Gene coexpression
MR
MR Locus Description
9.32738 Ahg493775 dynamin-like protein
13.1149 Ahg931357 CLIP-associated protein
16.7332 Ahg331859
17.2916 Ahg479191 ubiquitin protein ligase 6
17.9444 Ahg928500 Clathrin, heavy chain
33.0908 Ahg478791 Root hair defective 3 GTP-binding protein (RHD3)
36.0832 Ahg491335 3-deoxy-d-arabino-heptulosonate 7-phosphate synthase
37.9473 Ahg473387 SCAMP family protein
42.1426 Ahg479960 aldehyde dehydrogenase 2C4
44.699 Ahg489225 phosphate deficiency response 2
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression