Detail


ID : Ahg471347

Blast(Query):  A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|471347|fgenesh2_kg.1__1301__AT1G11950.1
Sequence
ATGGATGATA TAGTTTCTGC TAATGGAGTA AATTGCAAGC GTAATGGTGT AAAGGATAGT TCACTGGAAA CTTGTTGGCC GGAGAAGAAG AAACCGGTTG AGGCAACGAG TCTTAGCAGC GGTTCATCAG ATATAGAAGA AGAGAGTAGT GTGGAATGTC CGAAACCAGT GGCTAATCAA AGACGGAAAC GCTCTAAAGC TGATGAGATT AAAGCGAAAT CTTCAAGAAA GAGGAAATGT GATGATGAGA AGAAATGTGA AGAAAAGGAG AAGAAGCAGA GGAGCTCTGT AAAAAAGAGA GCAACTACAT GGAAAGAAGA AGAAGTTGTC GATGATGATG AAAAGAAATG CGAACAAGAA CTCCAAGTAG TTCCTTTCAT CAAGGCAACA TCTCGTAACA GGAGCAAGAA CGCAGACAGT GCGGATGCTT GGTTAGTTGG AAACGAGATC GATGTTAGCG CTTCGAGTTC GCGTTCTGAG TCTGAACTTT CGGATTCTCA TCTGAAAACT GAGTATTTTA ATGACTGCAG ACGCATGACA AGGAGTTTAA AGGCAGATTT GGGAGAGCTT GCGATTTGCC ATCAATGCTC GAAAGGGGAA AGAAGATATC TTTTCATTTG CACCTTTTGT GAAGAGAGGT TGTATTGTTT TCCATGTATA AAGAAATGGT ATCCCCATTT GTCCACGGAT GATGTCCTTG AAAAATGTCC CTTTTGCCGA GGAACTTGCA ACTGCTCCAC ATGTTTGCAC TCAAGTGGTT TAATCGAGAC ATCAAAGAGA AAGCTCGATA AGTACGAAAG ATTTTATCAT CTTCGATACT TGATTGTGGC GATGCTTCCT TTCTTGAAAA AGTTATGCAA AGCACAAGAT CAAGAAATCG AAACCGAGGC TAAGGTTCAA GGTTCAGTGG CTTCTCAAGT TGATATATCC GAGAGTCTAT GCTCAAATGA AGAGCGTGTC TTCTGTAACC ATTGTGCAAC CTCAATTGTG GACTTGCATC GAAGCTGTCC AAAGTGTTCC TTCGAACTTT GTCTGAACTG TTGCCAAGAG ATCCGTGGAG GTTGGCTTTC AGAACGCCCG GAATGTCAGC TACAATTCGA GTATAAAGGG AGCCGGTACG TACATGGCGA AGATGCAGAA CCGAGCTCTT CTTCTGTTTC TGAGGATGAA ACTACAATTC CATCCATGAA GTGGAATGCT GATGAAAATG GAAGCATACC GTGTGCGCCA AAAGAGCTAG GCGGTTGCGG TGACTCTGTG TTGGAGCTTA AGCGAATCCT ACCCGTGACT TGGATTTCAG ATTTGGAGCA AAAGGCAGAA ACATTCTTAG CCTCTTATTG TATCAATCCG CCAATGTCAT ATTGTAGATG TTCTTCTGAT ATGGAGATGA GTATGAAGAG GCAGGCAGCT TCGAGGAACG AATCCAGTGA CAATTACCTC TACTCTCCCG ATTCTTTTGA TGTCCTGAAG CAAGAAGAGC TTCTGCATTT CCAAGAGCAT TGGTCCAAAG GTGAACCAGT GATTGTTCGA AACGCTCTTA ACAACACAGC TGGTTTAAGC TGGGAGCCAA TGGTGATGTG GCGGGCTTTA TGTGAGAATG TTGATTCAGC AAGTAGCTCT ACGATGTCTG ATGTCAAAGC TATCGATTGT TTAGCTAATT GTGAGGTGAA GATCAATACT CGATGTTTCT TTGAAGGATA TAGCAAAGGA AGAAGATATG ATAACTTCTG GCCTGAGATG CTGAAGTTGA AGGATTGGCC TCCTTCAGAC AAGTTTGAAA ACCTTTTACC TCGTCACTGT GATGAGTTCA TTTCCGCATT ACCGTTTCAA GAATACAGCG ATCCTAGATC CGGAATTCTC AACATTGCTA CTAAACTTCC TGAAGGACTT CTTAAACCAG ATCTTGGTCC AAAAACCTAC ATTGCATATG GGACTTCAGA TGAGCTCGGT AGAGGCGATT CTGTGACTAA GCTTCACTGT GATATGTCGG ATGCGGTTAA TATTCTGATG CATACTGCTG AAGTAACACT AAGTGAGGAG CAAATGTCTG CAATTGAAGA TTTGAAACAG AAACATAAGC AACAGAATGA GAAAGAGCTT CAGGAGCAAA TTGATGAGAT TGTGATATAT GATGAAAAAG GTGGTGCACT TTGGGACATC TTTAGAAGAG AAGATGTTCC TAAGCTTGAA GAGTATCTAA GGAAGCATTG CAAAGAATTC AGACATACTT TTTGCTCTCC TGTTACAAAG GTGTATCATC CAATACATGA TCAATCATGT TTCTTAACCG TGGAGCATAA ACGAAAACTC AAGGCAGAAT TTGGGATTGA GCCATGGACA TTTGTGCAAA AACTAGGAGA AGCAGTGTTT ATTCCCGCGG GTTGTCCACA TCAAGTTCGG AATCTCAAGT CTTGCACAAA GGTAGCTGTT GATTTTGTTT CCCCAGAGAA CATCGATGAG TGTCTCCGTT TGACTGATGA GTTTAGACAA CTCCCTAAGA ACCATAAGGC TAGAGAAGAC AAACTTGAGA TAAAAAAGAT GGTGATCTAT GCAGTGGAAC AAGCTCTGAA AGAAGTGGAG ACATTGTTGC TAGATCGCAG CTAAAAGCTC TATAGCTTTG TTGTTGTAGG ATTGACAGCA GATTTTGTAG GATTGTTAAA GCCATGGCTA TTGTAGTTGG CTTTTGCTGT GATATATATA T
Length2701
Protein Sequence
Protein Residue
Map Locationscaffold_1: 4589797.. 4593505
Download Sequence
A.thaliana
AGI-codeAT1G11950.1
DescriptionTranscription factor jumonji (jmjC) domain-containing protein
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
7.48331 Ahg940877 Tetratricopeptide repeat (TPR)-like superfamily protein
8.12404 Ahg478973 ubiquitin-conjugating enzyme 25
10.7703 Ahg482661 ARM repeat superfamily protein
15 Ahg485718 Homeodomain-like superfamily protein
18.1384 Ahg947286 Acyl-CoA N-acyltransferase with RING/FYVE/PHD-type zinc finger protein
28.8097 Ahg479422 histone acetyltransferase of the TAFII250 family 2
40.7554 Ahg312467 microtubule-associated protein 65-7
41.7013 Ahg490494 S-adenosyl-L-methionine-dependent methyltransferases superfamily protein
44.699 Ahg477808 nucleotide repair protein, putative
55.857 Ahg489556 Protein of unknown function (DUF1624)
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression