| Annotation |
|---|
| Description | jgi|Araly1|477808|fgenesh2_kg.3__509__AT3G05210.1 |
| Sequence |
AAAAAGAGTC CGGGAAAAGA AAAGGGAAGA GTTTTTCAGA GAGATTCGAT CACTCATGGC GAACGAAGAC GACGACGGTG AGAAATCCAG AAGTCTGCAC CAACAGATTG CTAAAAAACC CAAAACCCAG ATCGTAATTG GTGTGCCATC GTACCAGGAA GTTATAGAAA GCTCACAGAC GAAGTCCACG CCCCCATCTC TCTTCAAGCC TTCCCAAAGT TTCTCTCAGG CATTCGCTTT CGTCAAATCG TCCGACGTCT ACTCTCCTCC TCCGTCTTCC TCCGCCGCCT CCTCTTCTTC GCAGCCGCCG GGCGCTTCTC AGGTGCCCAG TTCAAGCCAA CCGCTTCAAA CCGATGGTGC CTCATCTTCT TCTACTCCTG TAGCTACTGG CTCTTTACCA TCAAGCACAA CTCAAACTCG TAACGCAATC CTCGTTAGCC ATAGACAGAA AGGAAACCCG CTTCTTAAAC ATATCAGGAA TGTGAAATGG GTTTTCTCAG ATATCATTCC AGATTACGTG CTTGGTCAAA GCTCTTGCGC TTTGTATTTA AGCTTGCGGT ATCATCTGCT ACATCCGGAT TACCTCTATT TCCGCATTAG GGAACTACAA AAGAATTTCA AGCTAAGTGT TGTTCTTTGC CATGTCGACG TGGAAGATAC AGTGAAACCG TTGCTTGAAG TCACGAAAAC CGCTCTACTT CATGATTGCA CTCTATTGTG CGCCTGGAGC ATGACGGAAT GTGCCCGTTA TTTGGAAACG ATAAAAGTCT ATGAAAACAA ACCCGCAGAT CTCATCCAAG GCCAAATGGA TACAGATTAT CTTTCACGGC TAAACCATTC TCTTACAAGC ATTCGACATG TAAACAAGAG CGATGTAGTT ACACTTGGTT CTACATTCGG GTCTCTTTCC CATATAATCG ATGCATCCAT GGAAGATTTA GCACGTTGTC CGGGGATTGG CGAACGTAAG GTTAAGCGGT TGTATGATAC ATTCCACGAG CCTTTCAAGC GTGCAACTTC AAGCTACCCG TCTGTTGTAG AACCAACAAT CCCGGAAGCT CCAGTTCAGA AGAATGTGAG CTCAAAGGAA CCTCTTGTAG AAGAGGAGGA TTTTGTGGAG GACTCGAGAA AACGCAAGAA GAAGGAGCCC GAGAAAACTG TGAAGACCGC GCTCTCAGCT GTTTTTGCTC GTTACTCTGA TAAACTTAGC AAGAAAAAAG AGAAGCAAAA GGAGAAAGAT GCAACAACCG AGTCAGATAC TGAAATCCAC CAAGATTAAC ACAGTTCTGT TCATTGGGCA AGGCCATGGT GACCACATTC CTAAATTGTA ACTTAGCTTT ACTGGGTCTA ATTTGTGTGA TCTCTATCAT AGAATT |
| Length | 1376 |
| Protein Sequence | |
| Protein Residue | |
| Map Location | scaffold_3: 1831012.. 1833245 |
| Download Sequence |
|
| A.thaliana |
|---|
| AGI-code | AT3G05210.1 |
| Description | nucleotide repair protein, putative |
| TAIR curator summary | encodes a homolog of human ERCC1 protein (yeast RAD10), which is a DNA repair endonuclease. Mutants are sensitive to UV-B and gamma radiation (G2 cell cycle phase arrest) and are defective in dark-repair of pyrimidine pyrimidone dimers. This protein incises the 5' end of damaged DNA, similar to ERCC1/RAD10. |
| Alias | [ERCC1][UVR7][UV REPAIR DEFICIENT 7] |
| Gene coexpression |
|---|
| MR |
| MR | Locus | Description |
| 3.16228 |
Ahg494108 | Proline-rich spliceosome-associated (PSP) family protein / zinc knuckle (CCHC-type) family protein |
| 14.3875 |
Ahg475923 | phosphatidylinositol synthase 1 |
| 15.2971 |
Ahg484087 | Chaperone DnaJ-domain superfamily protein |
| 19.4936 |
Ahg488886 | PRLI-interacting factor, putative |
| 20.4939 |
Ahg481481 | Transmembrane proteins 14C |
| 25.04 |
Ahg473916 | peroxin 11A |
| 27.7128 |
Ahg478822 | exocyst subunit exo70 family protein D3 |
| 27.8209 |
Ahg496130 | RNA-binding (RRM/RBD/RNP motifs) family protein |
| 32.7109 |
Ahg474420 | Nucleotide-diphospho-sugar transferases superfamily protein |
| 41.5452 |
Ahg914753 | Leucine-rich repeat transmembrane protein kinase |
|
| RNA-seq |
|---|
Seasonal expression (July 2011 to June 2013) |
|
|
| The four seasons |
|
|
| Growth Chamber expression |
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