Detail



ID : Ahg471427

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|471427|fgenesh2_kg.1__1381__AT1G12750.2
Sequence
ACTTGCATTC GTCTTGCACT AAAGTTTCTG CAGGAGATGG GATAATCCGT AAGCGCTCCT ATGCGAATCT GCAATGGGGT TGAATCGTAT CTCCAGCTAC GCAGTCTTTT GCGTAAGCTA GCCCTTGTTC GAGAAACAGT CTCAGGTCTG AGATTTTTAT CAGAAAGTTT AAGGAAAATA TCTTGAAGGA GCTGCCACCA CCGAGAAGAG AATTGAAGAA ACATCAATTG TGTTCTTCAT ACGACGAGAG AAGAGAAAAT GTCGAGTAGA GATATGGAGA GAGGTAGGAA ACACAGAGGG GACACCCAGT GGACGTCGTG GCTGACTCCA ACAATTGTCG TGGCTAATGT CACCATCTTC ATCGTGGTCA TGTTCATCAA CGACTGCCCT AAGACAACCA GGGGAGCTAA CGAAGATTGC GTGGCAAAGT TTCTCGGCAG GTTCTCGTTT CAGCCGCTCA GAGAGAACCC TCTCTTGGGT CCATCTTCTT CAACATTGGA GAAAATGGGA GCTTTGGATT GGAGGAAAGT TGTGCAAGGA AATGAAAAAT GGAGGCTCAT CACTGCAATG TGGCTCCATG CTGGTATCTT TCACCTTTTT ACTAATATGT TTAATGTGAT CATATTCGGT ATCCGCCTTG AGCAGCAGTT TGGCTTCCTA AGAATTGGGC TCATCTACTT GATATCGGGA TTTGGCGGAA GCATTCTCTC AGCTCTCTAC CTTCAAAATA GCATCTCTGT TGGTGCCTCG GGTGCTCTCC TTGGACTCAT TGGAGCAATG TTATCCGAGC TGGTCATCAA CTGGACTATC TACGAGAGCA AGCTATGTGC TTTGTTCACG ATCTTGTTCA TCATCGCACT CGATTTAGCA ATAGGTTTGC TTCCTTGGGT TGACAACTTT GCTCACATTG GGGGGCTCTT GACTGGATTT TTCCTTGGGT TTATCCTACT GATCCAGCCT CAGGTGGGGT GGGAAGAGTC CCGCAACTCT TCTCAGTACG GTGCACGTGC CAAATCAAAG TATAACCCGT GCCAGTACTT GTTGTTCTTT ATTGCCGCTG TTTTGGTCGT CGCCGGTTTA ACAATTGGGT TGGTGATGCT GTTCAAAGGA GAGAATGGGA ACAAACATTG CAAATGGTGT CATCGCCTAG ACTGTTATCC TACTTCTAAA TGGTCTTGTT GATATTTCAA TCATTTTTAC TGTAAT 
Length1206
Protein Sequence
Protein Residue
Map Locationscaffold_1: 5036914.. 5039312
Download Sequence
A.thaliana
AGI-codeAT1G12750.1
DescriptionRHOMBOID-like protein 6
TAIR curator summary
Alias[ATRBL6][RBL6][RHOMBOID-like protein 6]
Gene coexpression
MR
MR Locus Description
20.7605 Ahg489965 Papain family cysteine protease
29.9333 Ahg497111 Gamma interferon responsive lysosomal thiol (GILT) reductase family protein
39.4968 Ahg480558 Protein kinase protein with adenine nucleotide alpha hydrolases-like domain
47.9583 Ahg471543 QUASIMODO2 LIKE 1
50.1996 Ahg339091 Exostosin family protein
52.6498 Ahg489647 Duplicated homeodomain-like superfamily protein
56.7362 Ahg928106 Heavy metal transport/detoxification superfamily protein
67.5056 Ahg899581 squalene epoxidase 2
68.1909 Ahg486512 homeobox-leucine zipper protein 3
69.6994 Ahg472287 Spc97 / Spc98 family of spindle pole body (SBP) component
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression