Detail



ID : Ahg486512

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|486512|fgenesh2_kg.5__2504__AT3G60390.1
Sequence
CCACAACCCC ATATCTCTTT GTCTGAAAAA ACTCTTTTGC ATATATAAAT ATAAGCCATA TCTTTGAAAC TGTACTGCTG CACAAGTGTA GAGGCAGTGG CACAACATCT TTAAGAAGAA AGAGAGAGAA GTCATTTATT CATTTTCTCT CGCTAAAAAA TCTTGAGAAC CCAGACATAA TTTTTCTTTG AGAAAAATGG GTGAAAGAGA TGATGGATTG GGGCTAAGTT TGAGCTTGAG TTTAGGTTTT AATCATAAGG ACCCGTCTTC GAGATTAAAT CCAATGCCTC TGGCTTCTTA TTCATCTTCA TCACACATGC ATATGCAGCA GAGCAATTAT AGCCATCCTC AAAAGATTCA GAACACTTGG ATTAACATGT TTCAATCTTC AGAGAGAAAC TCCGACATGA GATCGTTTCT CCGGGGAATA GACGTGAACA GAGCTCCATC GACGGTGGTT GTTGATGTGG AGGATGACGG AGCCGGAGTC TCATCTCCGA ATAGCACCGT GTCAAGCGTG ATGAGCGGGA AGAGGAGCGA GCGGGAGCTA ATGACTGCGG CAGCTGCAGC CGGAGGAGGA GGTAGAGTAG AAGATAACGA GATGGAGAGA GCTTCTTGCT CGCTCGGCGG TGGTAGCGAC GATGAAGACG GTAGCGGGAA CGGAGACGAC GGTTCGAGGA AGAAACTCCG TTTGTCTAAA GAACAAGCTT TGGTTCTCGA AGAAACTTTT AAAGAACATA GCACACTCAA TCCGAAGCAA AAGATGGCTT TGGCTAAGCA ATTGAATCTG AGGACGAGGC AAGTAGAAGT GTGGTTCCAA AACCGAAGGG CAAGGACGAA GCTGAAGCAA ACGGAAGTAG ACTGTGAATA TCTTAAGAGA TGTTGCGAGA ATCTAACGGA TGAGAATCGG AGATTGCAAA AGGAAGTGAG TGAGCTTAGG GCTTTAAAGC TTTCTCCACA CTTATACATG CACATGAAAC CTCCCACTAC TCTCACAATG TGCCCTTCTT GCGAGCGAGT CGCTGTTACA TCATCTTCGT CATCGGTGGC TCCTCCTGTG ATGACTTCAT CTTCTCCGAT GGGACCGATC AGTCCGTGGG CTGCCATTCC TCTCCGGCAA CGACCTGCTG CTGGTTCTCA TTAGAGTTTA ATTAATCTAA AGATAATTAG GTTTGGTGAT TTGTTTTTAT TATAATGTCA AAACGATCTT GGAAGTTCTT TTCAAGAGTT GGGTCCATGC TCTTCTTTCC TTTGTTTTAT TCAGTTTCTA TTTATAACTG AATTGCGAAA AATGGAAAAA AATGTACTAA TATTATTGTC GAATTATTAG TTTGGGG 
Length1337
Protein Sequence
Protein Residue
Map Locationscaffold_5: 18752475.. 18754553
Download Sequence
A.thaliana
AGI-codeAT3G60390.1
Descriptionhomeobox-leucine zipper protein 3
TAIR curator summaryEncodes homeobox protein HAT3.
Alias[HAT3][homeobox-leucine zipper protein 3]
Gene coexpression
MR
MR Locus Description
24.4949 Ahg333544 IQ-domain 18
24.98 Ahg472287 Spc97 / Spc98 family of spindle pole body (SBP) component
28.9828 Ahg908084 Zinc finger (C3HC4-type RING finger) family protein
32.4037 Ahg490253 Rho GTPase activating protein with PAK-box/P21-Rho-binding domain
36.3318 Ahg476492 Auxin efflux carrier family protein
41.6413 Ahg906687 GATA transcription factor 20
49.3964 Ahg926904 homeobox protein 33
53.7494 Ahg357521 ABC-2 type transporter family protein
54.5619 Ahg907271
61.8708 Ahg919239 ovate family protein 12
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression