Detail



ID : Ahg471533

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|471533|fgenesh2_kg.1__1487__AT1G13740.1
Sequence
TTCTCTCTCT TTTCCTCTGA TGTCCCCAAA GGGTCTTCTT CTTCTTCTTC GTATCTGCTC TTCACCTTCA ATTGTAACCT CTTCGTCTTC TTCGCCGTCT CTGGTAATAA CTCCGGCGAG TCTTTTTTTT TTTTTTTTTT ACTTTGATGT GAATTTGCAA AATTCACTGT TTAATTCATG ATAACAATTT TGGATTTTTG ATCGGATGTG AAATTCAGAG TTTTTCATAA CAAAGGAGAA ACAAAACAAA AATCTTTTTT TCTTTCTTCT ATTGTTTCGG AATCTATGGG TGAAGCAAGC AGACAACTAA GGGCATGGAA CAGAGAAATG ACGGTTACGA CAAATCTTTC TTTAGACATA GACAAATACC CGAGAGATCT GTTACGAGGT TTCATGTCTG AAAACGGCGG TGGAAGAGCC TTTCACGGCG GAGAATCAGG CTGCGATGAT GAGAGTGCCA TTGAGCTGAA TCTTGGTTTG TCTTTAGGAG GTCGATTCGG AGTAGACAAG ACTCCGAGGA AGCTGAAACG ATCTTCTTCT GTTTTGGACA CTGTACCATT TAACGATTCA ACGGTGGCTG AGCCTGAGAA TTACACGGTG GGTTTAGAGA GAACGACGTC GTTACCGGCG GAGATGGAAG AGGAATGGAG GAAAAGGAAA GAGATGCAGT CACTGAGAGA ATGGAAGCTA AGAGAAGGAG ATGTGAGAAA CAGAGTTTCA GAGTTGGGAA TTCTGATGAC CAAACGGTGT CCTTTGAGAA TGAGAGATGG GTTACTGCGA GTAAGAGTGG TTTCTTGCAG AGACATTTGG TTTCTTCTAA TAGACAAGTG TGTGCTCATC GAGCTTGTCG GAACTAGACA ACAAGAATCA GCAAGCTGCA ATGATGAAAG AAGCCCGAAG ATCGTGACAG GATGTTCATC GAACAGCGGA AGCCAGGGAA CAGAGAAACC GAGTGTGACT GGAGCCAACA AAGTGAATGA GAATGAGAAA GGAGTGAGGA GAGAGGACTC GGTGGTTAGG AAAGGAAAAG GGATGGCTAC GTCTACTGGT TTGGTTGACA TGCCTTGTGT GTTTACGAAA GGGGACGGGC CAAACGGAAG ACGGGTTGAC GGGATTTTGT ACAAGTATGG AAAAGGAGAG GAAGTGAGGA TAATGTGCAT TTGCCACGGT AGTTTCTTGA CACCAGCTGA GTTTGTTAAA CATGGTGGCG GAGGAGAAGT GGATCGTCCT CTACGGCATA TCGTTGTCAA CACTTCTTCT TCGACCTTTT AAATAGAAGA ATCGGTAAAG AAACCGGAGG TCTTTTGTTC TTTGTTTCAT TTTTCTTGTT GTTTTATCTT TTGGATCTCT AGTTTTTGGC TATAAGAATG AATGCCAAAT CTCAATCTTG ATGAAGATTA AGATTCTCAT GTTTTGTGAA CATGAAAGTA TCATCATCAA ATGATTCTTT CTCAAGCTCT CGCGTTTAAT ATAAGGCCTC TCTGCAAAGT GCGTAT 
Length1496
Protein Sequence
Protein Residue
Map Locationscaffold_1: 5512169.. 5513906
Download Sequence
A.thaliana
AGI-codeAT1G13740.1
DescriptionABI five binding protein 2
TAIR curator summaryEncodes a member of a small plant-specific gene family whose members interact with ABI5 and appear to be involved in mediating stress responses. AFP2 mutants affect a number of ABA mediated processes such as germination and response to osmotic and sugar stress. AFP2 nuclear localization is stress dependent.
Alias[AFP2][ABI five binding protein 2]
Gene coexpression
MR
MR Locus Description
16.7631 Ahg481400 EIN3-binding F box protein 1
17.3781 Ahg929107 Amino acid permease family protein
22 Ahg488738 Zinc finger C-x8-C-x5-C-x3-H type family protein
30.249 Ahg951371 RAB GTPase homolog A4A
33.7639 Ahg916555
37.7492 Ahg918513 DA1-related protein 6
41.6893 Ahg490122 PCF11P-similar protein 4
43.6348 Ahg477986 importin alpha isoform 1
46.6047 Ahg472912 ARM repeat superfamily protein
57.0789 Ahg347136 SWAP (Suppressor-of-White-APricot)/surp RNA-binding domain-containing protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression