Detail



ID : Ahg471615

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|471615|fgenesh2_kg.1__1569__AT1G14410.1
Sequence
TCCTCCTTCG TAATTCGCAG AGAAGAGAGA GGGAACAAAC ACAAAAGCAA TGTCGCAACT CTTATCTTCT CCTCCAATGG CGGTCAACTC CAATCCTCGC TTTCTCTCTT CGTCTTCAGC ACTCGTCGCC GGCGGTTTTG CAGTGAAACG CCATGGATTC GCCTTGAAAC CGACGACGAA GACGGTGAAG CTCTTATCGG TTAAGTCCCG CCAGACGGAT TACTTCGAGA AGCAGAGATT CGGTGACTCT TCTTCTTCTT CTTCTCAAAA TGCTGAAGGA TTGCCTGCTA GATTTTACGT GGGTCATTCG ATATACAAAG GGAAAGCTGC GCTAACAGTG GAGCCAAGAG CACCAGAGTT CGTGGCTTTA GACTCTGGAG CTTTCAAGTT GTCGAAAGAT GGTTTCGTAT TGCTCCAGTT TGCTCCTTCT GCTGGTGTAC GACAATATGA TTGGAGCAAG AAACAGGTGT TCTCATTGTC TGTTACAGAA ATCGGAACTC TAGTTAGCCT AGGCCCGAGG GAATCTTGTG AATTCTTCCA TGATCCATTC AAGGGGAAAA GTGATGAGGG AAAAGTGAGG AAAGTGTTGA AAGTTGAGCC TCTCCCAGAT GGTTCTGGTC ACTTCTTCAA CCTAAGTGTT CAAAACAAGC TTGTGAATGT GGATGAGAGC ATTTACATAC CAATTACTCG AGCAGAGTTT GCTGTTCTTA TCTCTGCCTT CAATTTTGTC TTGCCTTACC TTATAGGCTG GAATGCATTT GCAAACTCCA TCAAACCAGA AGACACAAAC CGTGTGAACA ACGCTTCGCC TAACTATGGA GGAGACTATG AATGGAATAG ATGATGAATC TTAGGGCCAT AATAGGAACA TATATCAGAG ATCATCCTAG TCCTACCCTT TTTGTTTTGC TGATAGGTTT CTTGAAGATT GATATACGTT CGTAGGTAGC AGAAGAGACT AAAAGTAGTG TTACTTTTTC TTCCTTTTGA CCAAATGTAT TTTGTGTTAA GCGGTTGTAT CTCAAAACAT CAGTCTGATC TTATTTGTTT TTGATTGAAG AG 
Length1062
Protein Sequence
Protein Residue
Map Locationscaffold_1: 5785721.. 5787497
Download Sequence
A.thaliana
AGI-codeAT1G14410.1
DescriptionssDNA-binding transcriptional regulator
TAIR curator summaryEncodes a homolog of the potato p24 protein. Binds single strand telomeric repeats. Negatively regulates telomerase activity and telomere length.
Alias[ATWHY1][PTAC1][WHY1][A. THALIANA WHIRLY 1][WHIRLY 1]
Gene coexpression
MR
MR Locus Description
17.7482 Ahg928524 elongation factor P (EF-P) family protein
29.0861 Ahg470426 Ribosomal protein L14p/L23e family protein
29.8664 Ahg946494 Ribosomal protein L23/L15e family protein
33.5261 Ahg923746 Zinc-binding ribosomal protein family protein
38.8587 Ahg925613
41.497 Ahg944570 beta carbonic anhydrase 5
44.6094 Ahg477492 Ribosomal protein S7e family protein
48.775 Ahg318480 Translation elongation factor EF1B/ribosomal protein S6 family protein
49.2849 Ahg494941 Ribosomal protein L13 family protein
50.7543 Ahg929752 Amino acid kinase family protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression