Detail



ID : Ahg925613

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|925613|scaffold_201174.1
Sequence
CAGTCACCAA TCCAGCAACC ATGGGAAACT CTAGAATTCA AGTTAACAAA GCTCACAAGA CTAGATTTAC CTCCAAATCT TCTCGTAATC TCCACAGAAC TTCCCTCCAA GATAGTTGCC GGATTGGGAA ATCAGACAGT AATAACTATG TTAAAGGTGC TAAAGCTGCT CGTGTTCAGC GTGGCAAGAT GCTTCGAGAG CAGAAAAGGG CAACAGTTTT GAAGGAGAAG AGAGCATCAG GAGGATTAAA CAGTGCTCCT CGTGTTATCG TTTTGTTTCC TCTCTCTGCC TCTGTGGAAT TGGATTCACT TAATGAAGAT CTTTTAGAGC TATTATCTTC TGATGGTTCT GGGGTCACTT CTTCGACAGT TGCATCTTCT GAGTATAAGC TTAAAGCAAC CGTGTTAAAG GCACCTCATG GGGATCTTTT GACATGCATG GAAATGGCCA AGGTTGTTGA TTTGATGGCT TTTGTTGCAT CTGCAAGCTC TCCATGGGAA GAGAATAAAT CTAACTATAT AGATTCATTT GGAAATCAGT GTCTTTCTGT GTTTAGATCA ATTGGTCTAC CAAGCACCAC TGTATTGATT CGTGATTTAC CGAGTGAATT AAAAAAGAAA AATGAGCTGA AGAAGATATG TGCCTCTCAA CTTGCTTCTG AATTTCCTGA GGATTGTAAG TTTTATCCAG CAGATACCAG AGATGAGTTG CATAAGTTTA TGTGGTTATT CAAAGCACAA AGGCTTACTG TACCTCATTG GCGGAGTCAA AGACCATATG TTGTGGCTCA GAAGGTTGGG ATGCTGGTGG ATGATGAAAG CTCAGGAAAG TGCACTCTAC TTCTCTCTGG TTACTTGCGT GCTCGCAAAC TGTCTATAAA TCAGCTGGTT CACGTTTCTG GCGTTGGTGA TTTTCAGTTC TCAAAAATTG AGGTGCTAAA CGAGCCATTT CCTTTGAATG AAAGGAAAAA TCAGAATTCC ATGGAATTAG ATGCTTTACA TGATGAAGAG GTATTGAACT CTCTGGTTCC TGATCCTATA AAACAAGAGC CTTTAGTAGT TGAAAACACT CCAGATCCTT TAGCAGGGGA ACAGACATGG CCAACAGAGG AAGAAATGGC TGAGGCTGAC AAAAATCAGA AACAGGGAAA GTTAAAGAAG AAGACTTTGC CAAGAGGGAC TTCAGAATAT CAGGCTGCTT GGATTGTGGA TGACACAGAT GAAGAAGATT CTGATATTGG TGATTCTGAT GATAACAGTA TGGTATTGGA TAGAGAAGAG GATGCCAATG AGGAAAGAAA GTATGACCAA GAATTTGAGG ATGACGAAAA ATCACTGAAC GTGCGGGATT TTGATAGTGG AACTCAGAAT GACTCCGAGA TGATGGATGA TGAAGACTTG ACAGATGAAC AAATTAAGGA TGAAATAAAG AAAATCAAAG AGGCACATGC TGATGACGAG GAATTTCCAG ATGAAGTAGA GACTCCCATT GATGTTCCTG CAAGAAGACG TTTCGCAAAG TACAGGGGTC TTAAATCCTT CCGAACCTCC TCGTGGGATC CAAATGAGTC TCTACCTCAG GACTATGCTA GAATTTTTGC TTTTGATAAC GTTGCCAGGA CTCAAAAGCT TGTGCTCAAG CAAGCCCTGA AGATGGAAGA AGAAGACAGA GATGATTGTG TACAGACTGG GTCATATGTC CGACTGCATA TTAAGGAAGT GCCTCTTGGT GCTGCCTCTA AACTATCCTC CCTTGTGAAC ACAAAACCCA TTATAGGATT TCGCCTTATA CAACACGAAA TCCAGATGTC AGTTCTGCAT TTTAGTGTAA AGAAGTATGA TGGTTACGAA GCTCCTATTA AAACGAAAGA AGAACTTATG TTCCATGTTG GTTTCCGTCA AGTCATTGCA AGGCCGGTAT TTTCAACCGA CAATTTCAGC TCAGACAAGC ACAAGATGGA GAGATTCTTG CATTCAGGGA GTTTCTCGTT GGCTTCAATA TATGGCCCAA TATCTTTCCC ACCCCTTCCT TTGGTAGCTC TAAAGATATC TGAAGGGTCA GATCCTGCCG TTGCTGCCCT TGGTTCCTTG AAAAGCATTG AACCCAACAA AATAATTTTA AAGAAGATAA TATTAACTGG GTATCCTCAG AGAGTATCAA AAATGAAAGC ATCAGTCAGA TATATGTTCC ACAACCCAGA AGACGTGAAA TGGTTCAAGC CTGTAGAAGT GTGGTCAAAA TGTGGTCGTC GTGGTCGCGT GAAGGAGCCA GTGGGCACAC ATGGGGCGAT GAAATGTATA TTCAATGGAG TGGTGCAGCA ACATGACATT GTCTGCATGA ACTTGTACAA ACGTGCGTAC CCTAAGTGGC CTGAGCGTCT GTACCCGCAG CTTCTCTGAT TCCAATTTGT AGAATGAAGC T 
Length2421
Protein Sequence
Protein Residue
Map Locationscaffold_2: 8869547.. 8874055
Download Sequence
A.thaliana
AGI-codeAT1G42440.1
Description
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
6.32456 Ahg944981
12.9615 Ahg478927 RNA-binding (RRM/RBD/RNP motifs) family protein
18.3303 Ahg480561 Transducin family protein / WD-40 repeat family protein
19.1311 Ahg920476 Cobalamin biosynthesis CobW-like protein
21.7256 Ahg922250 Ribosomal L18p/L5e family protein
22.9783 Ahg484880 histone deacetylase 3
24.4949 Ahg478034 GPI transamidase component Gpi16 subunit family protein
28.2489 Ahg476028 male gametophyte defective 3
28.4253 Ahg473247
33.6155 Ahg924591 GMP synthase (glutamine-hydrolyzing), putative / glutamine amidotransferase, putative
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression