| Annotation |
|---|
| Description | jgi|Araly1|471839|fgenesh2_kg.1__1793__AT1G16420.1 |
| Sequence |
ATAAAGGGAA AACAAAGGTT TAATTCATTC ATTCGTCAAT GGCGAAGAAA GCAGTTTTGA TAGGAATCAA CTACCCAGGG ACCGCGGTGG AGTTACGCGG CTGTGTCAAC GACGTCCGCC GGATGCAGAA ATGCCTAATC GAACTTTACG GATTCGCTAA CAAGGACATC ACCATACTGA TCGACACAGA TAAATCATGT ATACAACCTA CAGGCAAGAA CATCCACGAC GAATTGACTA GACTCATCGC ATCAGGGCAA TCTGGCGATT TTCTGGTCTT TCATTACAGT GGACATGGCA CGAGAATCCC GCCTGGGATA GGAGAATTAG GCGACTCTAC AGGGTTTGAC GAGTGTATCA CTCCTTGCGA TATGAATCTA ATTAAGGACC ATGATTTTAG AGAAATGGTG TCACATGTAA AAGAAGGCTG TCAATTGACG ATAATCTCGG ACTCTTGTCA CAGTGGTGGT CTCATCGAGG AAGTAAAGGA GCAGATTGGG GAAAGCCATG TGAAGCCGAT CAATGAGGTA AAGGAGCAGA TCGACGAAAG CCATGTGAAG CCGCCAAAAC TTGGGATTGC TAGTTACTTG CTTAGCATTG TGATGAATTT GTTAGCGACT TGTGGAATCT CAAAATCTCA GAGAGACCGT GGAGGTGGCC AAGAAAGCTT TAGCGGAGAG ATAGAATTAG CGAGCGATTA TGAAACGTTT GATATAAAAA CTAGATATCT ACCTTTCGAA AGCTACGTAA GTCTTCTCAA GCAACAAACC GGGCAAACCA ATATCGAATC TCGGAGAATC AGACAGACAC TTCTCAAATT ATTCGGTGAA GACTCAAGCC CGATTCATCA GAGAGGTTTA AGTGACCTAG GAAACTTCGA TGTTAATGCA GGTGATTCTG GAGCCCCAGG ATCGATTGCC GACAAGGGGA TTCTGTTAAG TGGATGTCAA ACAGATCAGA GATCAGAGGA TGTTTATGTG ACAAGAACTG GAAAAGCTTA TGGGGCATTC AGTGATGCGA TTCAGACGAT ATTGTCGACG CCGAGGAAGG AGAAGAAGAA GATTACGAAC AAAGAAGTGG TTTCCGAAGC TAGAGTGCTT CTCAAGAAAC GGGGGTTTAG TCAACGACCA GGCTTGTATT GTCATGACCG TTATGTTAAT AAACCATTCA TATGCTAAAA CACAAGAAGT TCATCTGAAG ACTTTTGTTT GATGGTGCAT TTCAAGTTAT TTCTTTTTGT GATTTAAGAT TTTTATGTAG TCTCTCAGTG ACTTGTGATT CAAGTAATAT ACAATTTTTT TT |
| Length | 1302 |
| Protein Sequence | |
| Protein Residue | |
| Map Location | scaffold_1: 6566251.. 6567664 |
| Download Sequence |
|
| A.thaliana |
|---|
| AGI-code | AT1G16420.1 |
| Description | metacaspase 8 |
| TAIR curator summary | Encodes a metacaspase (cysteine-type endopeptidase) that is involved in promoting programmed cell death in response to hydrogen peroxide (H2O2), UV light, and methyl viologen (MV). Transcript levels rise in response to UV-C, H2O2, and MV. In vitro assays demonstrate that this enzyme has a preference for cleaving after an arginine residue, and it has a pH optimum of 8.0. |
| Alias | [ATMC8][AtMCP2e][MC8][MCP2e][ARABIDOPSIS THALIANA METACASPASE 8][metacaspase 2e][metacaspase 8] |
| Gene coexpression |
|---|
| MR |
| MR | Locus | Description |
| 11.7047 |
Ahg319046 | Regulator of chromosome condensation (RCC1) family with FYVE zinc finger domain |
| 17.9165 |
Ahg928191 | invertase H |
| 19.0263 |
Ahg318745 | Major facilitator superfamily protein |
| 22.9783 |
Ahg945082 | Galactose oxidase/kelch repeat superfamily protein |
| 23.9583 |
Ahg900923 | myb domain protein 14 |
| 27.4955 |
Ahg951906 | MATE efflux family protein |
| 31.749 |
Ahg484482 | Protein kinase superfamily protein |
| 33.2415 |
Ahg924343 | F-box associated ubiquitination effector family protein |
| 35.2704 |
Ahg905722 | |
| 39.6232 |
Ahg913571 | |
|
| RNA-seq |
|---|
Seasonal expression (July 2011 to June 2013) |
|
|
| The four seasons |
|
|
| Growth Chamber expression |
|
|