| Annotation |
|---|
| Description | jgi|Araly1|471988|fgenesh2_kg.1__1942__AT1G17760.1 |
| Sequence |
AGAACCGCGG AAAATATTCG TTTCCTAAAG ACGGACCGGT TGCTTTGAGG TTCTCCATTC GACAATAGGG TATCACCGTC ACCGACCACC GTGTTTCGGC CAGACCCGTC GGAGGAGTGT TGAATCTCAG ATTAGGGTCT ACGTATATCA CCATTGCGTG GAATATTTGA AAGACTGTTC TTCCGAAGGT GAAATTCATG GCTGATAAGT ACAACGTCGA GGAAGCAGAG GCTTTGGCCA AGAGAGCTTT GCATCTACCA ATTGCACAGG CGACGCCCAT CTACGAGCAG CTTTTGTCAC TTTATCCCAC TTCTGCGAGA TATTGGAAGC AATATGTGGA GGCACACATG GCTGTAAACA ATGATGATGC TACCAAACAG ATATTTAGTC GTTGTTTGTT GACCTGCCTT CAAGTTCCTC TTTGGCAATG TTACATTCGG TTCATCAGAA AGGTCTACGA CAAGAAGGGA GCAGAGGGTC AAGAGGAGAC CACAAAGGCT TTTGAGTTTA TGCTTAACTA TATCGGGACA GACATAGCAT CTGGGCCTAT ATGGACCGAG TACATTACCT TTCTAAAATC TCTTCCGGCT CTTAACCTAA ACGAAGATTT GCATCGGAAG ACTGCTCTCC GAAAAGTGTA TCATAGAGCT ATATTAACTC CGACCCACCA CGTTGAACAA CTTTGGAAAG ATTATGAGAA CTTCGAAAAT TCTGTTAATC GTCAATTGGC AAAAGGACTT GTAAATGAGT ATCAACCAAA ATTTAACAGC GCCAGGGCTG TATATAGGGA ACGCAAGAAG TATATTGAAG AAATTGATTG GAACATGCTT GCTGTCCCAC CAACAGGATC TTCCAAGGAA GAAACCCAGT GGGTGGCTTG GAAAAAGTTT TTGTCCTTTG AAAAAGGAAA CCCTCAAAGG ATTGACACGG CCTCTTCAAC TCAGCGGATT ATATATGCCT ATGAACAGTG TCTGATGTGT TTATATCACT ATCCCGATGT ATGGTATGAC TATGCTGAGT GGCATGTAAA ATCTGGTACC ACGGATGCTG CAATCAAAGT ATTTCAGCGA GCTCTTAAGG CCATTCCTGA TTCGGAAATG TTGAAATATG CTTATGCTGA GATGGAGGAA TCTCGTGGAG CAATTCAGTC AGCAAAGAAA TTATATGAAA GCATTTTGGG GGTTAGCACA AACTCTTTGG CACATATACA ATTCCTTCGT TTTCTCCGGA GGGCTGAGGG TGTTGAAGCT GCTCGCAAGT ACTTTTTAGA TGCTAGAAAA TCTCCTAGCT GCACATATCA TGTGTATATT GCTTTTGCTA CCATGGCCTT TTGTATTGAC AAGGAACCAA AGGTTGCACA TAATATATTT GAGGAGGGGT TGAAACTCTA TATGAGTGAA CCTGTTTACA TCCTTGAGTA TGCAGATTTC TTGACTAGAT TGAATGATGA TAGAAATATC AGAGCTCTAT TTGAGCGGGC ATTAAGCACA TTACCAGCTG AAGACTCTGC TGAGGTCTGG AAAAGATTCA TTCAGTTTGA GCAAACATAT GGAGATCTTG CTAGTATTCT AAAGGTTGAG CAGAGAATGA AAGAAGCACT TTCTGGAAAA GGGGAAGAGG GATCTTCTCC TCTAGAGAGT TCACTTCAAG ATGTTGTTTC TCGGTACAGT TACATGGATC TTTGGCCATG CACTTCTAAC GACCTTGATC ATTTAGCCAG ACAAGAGTTG CTTGTGAAGA ATCTGAATAA GAAAGTAGGG AAGACAAATC TACCTCATGG TCCTGCGGCT ATAGGTAGTG TAGCTTCTTC GTCAAAAGTT GTTTATCCAG ATACATCGCA GATGGTTGTT CAAGACCCGA CAAAGAAATC AGAGTTTGCT AGTTCTACAA ACCCAGTGGC AGCTTCTGCT TCGAACACCT TCCCAAGTAT TGTGACTGCA ACTGCAACTC ATGGATCAGC CAGCACGTTT GACGAATTAC CAAAGACTAC TCCACCTGCA TTGTTAGCGT TTTTAGCTAA CTTACCTATT GTTGACGGTC CAACACCCAA TGTGGATGTT GTTCTGTCGA TATGTTTGCA GAGTGACTTT CCAACAGGTC AAATTGTAAA GCAGAGTTTT GCTGCTAAAG GCAATCCTCC AAGTCAAAAC GATCCCTCGG GTCCAACCCG CGGTGTGTCT CAAAGATTAC CAAGAGACAG AAGAGCTACA AAGAGAAAAG ATTCAGACAG GCAAGAAGAA GATGATACAG CAACTGTACA AAGCCAGCCT TTGCCCACAG ATGTTTTCAG ACTAAGGCAG ATGCGAAAAG CTCGAGGGAT CGCAACATCA TCACAGACAC CAACCGGTTC CACATCGTAT GGTAGTGCCT TCTCAGGCGA GCTTTCTGGT AGCACTGGCT AAAATATACT GAGATTGGCA AATTTGTGAA GCCTCTCTTA TTCTTGTAAT TTATTTCCCC CAACAATTCT AACTTATGCA ATAAAA |
| Length | 2486 |
| Protein Sequence | |
| Protein Residue | |
| Map Location | scaffold_1: 7114640.. 7120948 |
| Download Sequence |
|
| A.thaliana |
|---|
| AGI-code | AT1G17760.1 |
| Description | Tetratricopeptide repeat (TPR)-like superfamily protein |
| TAIR curator summary | Encodes a homolog of the mammalian protein CstF77, a polyadenylation factor subunit. RNA 3′-end–processing factor of antisense FLC transcript. Mediates silencing of the floral repressor gene FLC. |
| Alias | [ATCSTF77][CSTF77][ARABIDOPSIS THALIANA CLEAVAGE STIMULATION FACTOR 77] |
| Gene coexpression |
|---|
| MR |
| MR | Locus | Description |
| 5.19615 |
Ahg490593 | |
| 9.79796 |
Ahg940406 | conserved peptide upstream open reading frame 41 |
| 11.5758 |
Ahg324617 | embryo defective 1703 |
| 12 |
Ahg473899 | exocyst complex component sec3A |
| 14.3527 |
Ahg486560 | SEC7-like guanine nucleotide exchange family protein |
| 15 |
Ahg900162 | Glutamine amidotransferase type 1 family protein |
| 15.8114 |
Ahg919313 | Basic-leucine zipper (bZIP) transcription factor family protein |
| 20.4939 |
Ahg479402 | transducin family protein / WD-40 repeat family protein |
| 26.4953 |
Ahg495374 | RNA-binding KH domain-containing protein |
| 29.1548 |
Ahg473569 | Pseudouridine synthase family protein |
|
| RNA-seq |
|---|
Seasonal expression (July 2011 to June 2013) |
|
|
| The four seasons |
|
|
| Growth Chamber expression |
|
|