Detail



ID : Ahg472080

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|472080|fgenesh2_kg.1__2034__AT1G18600.1
Sequence
TTTCCAAAAC ATGAAGAAAG TTCTTACACA AAAACATCAA AGCTGCTCAA TTTTGATATG TGTCGAACAG AGACTATCGA GTAATACCCA GTAGTCGAAA GCTCTCGCCT TTTCATTTTC GCCAATTGGG CAAATTTACT AAAATGAAGG CGATTTTCAA CCGTAGAGTC GTCGTCGACT CATCTTCGCG TCTCACCAAG CTGCTCACGA ACCCAACTAC TCATTCTCAC CCGAATCGTC AAACTTTCAT TTCGCTCTAT AAACCGAACC AGAACCGCCA TTTTCGAACA CACTATCTTC CTTCAACCCC GTCGTCTCCT CCCGTGAGCC GGTTTGACCC TTCTCAGCTA TGGCGATCAG AGACAATTCG TGGGTTTTTC GCAACCGCTT TAGGGAACAA AGCCGTGAAA TTGGGAAATC TAGTGGAATC AAGAGTTGGG TTCATTGGTT CTCAGTTTCC CAAAAAGGGT TTCGAATTCG AGAGGTTTTC TGGGTTTCAA AGGCGTGGCT GGAAGCATTG GCTTCAAGGA TTATCAGATC GTGACGTCGT TCTTGGATTA GTTATAGCTA ACACTGGTGT GTTTATGATG TGGCGTGTTT TCAATCAACA ATTCATGATG AATAATTTCA TGATATCGTT GGATAATTTC ACGAGTGGGC GTCTACACAC TCTGATAACT TCAGCATTCA GTCATATTGA TATTGGACAT ATCGTCTCAA ACATGATTGG ACTATACTTT TTTGGAACCA GTATCGCTAG AAACTTTGGC CCTCAGTTCC TTTTGAAGCT GTACCTTGCT GGAGCCCTTG GTGGCTCTGT TTTCTACTTG ATTCACCATG CTTATATGGC TACAACATCG CCCAAGGGCC AAGGAGCTTT TGTGAGGGAT CCATCGAGAA CCCCGGGACT GGGCGCGAGT GGAGCCGTGA ATGCCATCAT GCTGCTGGAT ATCTTCCTGC ACCCAACAGC TACTCTATAC TTAGAATTCA TCATTCCAGT TCCCGCAATG TTGCTTGGTA TCTTCCTCAT AGGAAAAGAC ATTTTAAGGA TAACAGAGGG GAACAGTAAC ATATCAGGTT CAGCTCATTT GGGAGGAGCT GCAGTTGCAG CCATCGCCTG GGCTCGGATT AGGAAAGGCC GCTTCCGCTT TTGACTTGAC CTTGCTTGGT TTTGGTCATC TTTAGAGAAA TCTTTCTTTA AATGATTTAA GTAACTTTGA ATCTTTGA 
Length1228
Protein Sequence
Protein Residue
Map Locationscaffold_1: 7439523.. 7441771
Download Sequence
A.thaliana
AGI-codeAT1G18600.1
DescriptionRHOMBOID-like protein 12
TAIR curator summaryMitochondrion-located rhomboid-like protein
Alias[AtPARL][ATRBL12][PARL][RBL12][ARABIDOPSIS RHOMBOID-LIKE PROTEIN 12][presenilins-associated rhomboid-like protein][RHOMBOID-like protein 12]
Gene coexpression
MR
MR Locus Description
33.8231 Ahg952212 ribosomal protein L23AA
40.1746 Ahg345995
41.3521 Ahg470810 ribosomal protein S15A
59.4643 Ahg476349 Domain of unknown function (DUF543)
61.4817 Ahg483116 Ribosomal protein S26e family protein
73.7902 Ahg929306 chloroplast 30S ribosomal protein S20, putative
76.092 Ahg480484 tRNA/rRNA methyltransferase (SpoU) family protein
86.487 Ahg496470 RAC-like 10
91.2579 Ahg317589 O-Glycosyl hydrolases family 17 protein
91.4986 Ahg313543
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression