Detail



ID : Ahg472254

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|472254|fgenesh2_kg.1__2208__AT1G20240.1
Sequence
ATGTGTGTTG GTTTTGCGGT AAATCGAAAT CGAACCACTA TGAGATTCAA GATCGTTTGC ATACTCGAGA TGCAAACGGT CTACAAATTC GAGATCAGCG ACGGATATTC ATGGAGATTA TCGGAAACGA CCATCACCCC TAGCTCAAAA AGTGATCTCA TGACGCGAAT GAAACCTGTT TACTTGGACA ACACTCTTCA TTGGTTGAGA AATGATGGGA GCATCATAGC TTTTAATCCC GAGACAGAGC AAGCACGATT GATTCCTTCC AGATTCAGAT TCGATGATAA TTATATGGTC ATAAAACCAT TATTTGCAGC AAACGAAGAT ATCAACCGCC TGACTTTGAT ATCAATGGCG ATAAAAAGAA TCTCAGTTTA CACACTACTC CAGGATTCGA AGTGGGCTCT CGCCAAGCGG ATCAAGTACA TATCTACGGA CAGAAGAGAG ATTATAGCCT CGGATGTGGT TGCGTACGAT GGCAAGTGTC TTGTGTTGAG GCAGATGAAG AAAGACGATC CTCATTGGAG AAGTGTGGTT CATGTGTACG ACATGGAAGC TAACTGTTGG AGAGGGCTAG GGGCCATATG TCAGTATGCT ATCGTCCACG ACTTGTATAA GATTACGCCC TCTTTGTTCT TTGTCGAAGA GGATGATGAG AAGCAAAAGG TAGTTGTAGC ATCTAATCAC CAACACATGT ACCTAACCTC GGTTTTGGGA GCCATTGATA CCACCAACTA TGGCGCCACT TACATCTTTT GCCAGCCTTT GGTCTCTTCA AGAGATTCTA TGTCACCGGG AAATGAAGTG AACTTGTTTA GAGAGCCATG TTACATTTTT GGCTCCTGCT CCGGCCTTCT CCTACTATAT ATTGGTGGCC TCTTTGTCGT TAATCCCCTC ACAAAGAGGT TTCGACTTTT GGATCGCTCT GGCTCAAAGC TTCTGCCTAT AATAGTTGGT GGTGATCGTA ACGTTGCTGG TACGGAAAGA GCTATGTGCG TCGGTTTCAC GGTAAATGGA AACCGAACCA CTAAAAGATT CAAGATTGTC TGCATACACG AGATGGAAAC GGTGTACGCA TTCGAGATCA GCGACGGATA TTCTTGGAGA TTATCGGAAA CGACCATCAC CAATAGCTCA AAAAGTGATC TCACGTTGAG AAACGATGGG AGTATCATAG CGTTTAATCC CGAGACAGAG CAAGCACGCT TGATTGCTTC CATATTTCAT CAAAAACCAG AGATGAAACT GTTTTCCGCT GCAGACGATA AGTTGAATCG CTTGACCTTA ATATCGGGGA CGGGAGAAGA AATTACAGTT TATACACTAC TCGAAAATTC CAAATGGACC CTCGCCAGGC AGATCAAGAA CGTATCTATG AAGGAAAGTG AACTTGTATG TTGGAACATT GTTGTGTACG ATGGCAAGAA TCTAGTGGTG AGGGAGATGA AGGATAGATT AAAAGGTGTG GTTCATGTGT ACGACATGGA GGTTAACAGT TGGGGAGTTA TAGGGTCAAC CACATCTTGG TCCACTCGCG TCCCAGACTT CTATAAATTT ACGCCCACCT TGTTCTTTGT CGAGGAAGAT GAGCAGCATA AGGTGGTTGT AGCTTATAAT GACCAACATG TGTCCTATCT AACTGCGATT ATGGGACTCG TTGATACGAC CTAG 
Length1674
Protein Sequence
Protein Residue
Map Locationscaffold_1: 8232392.. 8276616
Download Sequence
A.thaliana
AGI-codeAT1G20240.1
DescriptionSWI-SNF-related chromatin binding protein
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
23.0434 Ahg472260 Haloacid dehalogenase-like hydrolase (HAD) superfamily protein
31.0966 Ahg351609 Protein of Unknown Function (DUF239)
38.1576 Ahg949069 transposable element gene
45.299 Ahg932542 RNI-like superfamily protein
55.4797 Ahg925023 F-box/RNI-like superfamily protein
62.3538 Ahg477013 Terpenoid cyclases family protein
66.5958 Ahg890287 Protein of unknown function (DUF1264)
78.7528 Ahg929770 Protein kinase superfamily protein
80.0875 Ahg316947 Pectin lyase-like superfamily protein
81.7129 Ahg478975 expansin 12
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression