Detail



ID : Ahg472258

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|472258|fgenesh2_kg.1__2212__AT1G20300.1
Sequence
CTTCCTCCTT CTTCACCATC GCCACTCTGC TCCGTTCGAC ATTTAGAAGA GAGTGACCAA AATCTTCCAT TAATGGCGTT ACTCCGGTCA AAATTCCATC TTTCTCGAAC CCTTTACTTC ATCTCTCCTC GTCTACCAAA ACCCTTCTCC ACCTCCGCAA CTTCTCTACT CAATGACCAT GAAAACGACG AATCCGCCGC CACCGTAACC GGCGTCGTCT CTGTCCCAGT CTCATCTCTG TTAACTCCAG AAGATACACA AACCGTAGAA AAGTTCCATT CAATCATCAA AGACCACTAT CGCAAAAACC CTACAAACCC CAACGACGCC GTCTTAAACC CTAGCTTAAC CCTTCCTGCT CTCTCCCTCG ATTTCTCCCA AATCAACGCT TCTCGAATCT CTCCCTCTGT CGTCCGATGC GTGATAGAGA AGTGTGGCAG TGTCCGCCAT GGAATCCCTC TTCACCAATC TCTAGCTTTC TTCAATTGGG CCACTTCACG AGACGATTAC GACCAAAAAT CGCCTCATCC TTACAACGAA ATGATCGATC TTGCAGGAAA GGTTAGACAA TTTGACTTAG CTTGGCATTT GATTGATCTC ATGAAATCGA GAAACGTCGA GATTTCGATT GAGACCTTCA CGATTTTGAT TAGACGTTAT GTTAGAGCTG GTTTAGCTTC AGAGGCTGTA CATTGCTTTA ATCGTATGGA AGATTACGGT TGCGTTCCTG ATAAAATCGC GTTTTCGATA GTTATTAGTA ACCTTTCTAG AAAGAGGAGA GCTAGTGAAG CTCAGTCGTT TTTCGATAGT TTGAAAGATA GGTTCGAGCC TGATGTTATA GTTTACACCA ATTTGGTTCG TGGGTGGTGT AGAGCTGGTG AAATCTCTGA GGCAGAGAAA GTGTTCAAGG AGATGAAATT GGCTGGGATT GAACCGAATG TGTACACTTA CAGCATTGTG ATCGATGCGT TGTGTAGATG CGGGCAAATC AGCCGCGCGC ATGATGTTTT TGCTGATATG TTAGATTCGG GTTGTGCTCC AAATGCGATT ACTTTCAATA ACTTGATGAG GGTTCATGTG AAAGCAGGAA GAACAGAGAA GGTTTTGCAG GTTTATAACC AGATGAAGAA GCTAGGATGC GAGCCTGATA CTATTACTTA TAACTTCCTC ATTGAGACTC ATTGCAGAGA CGAGAATCTT GAAAATGCGG TGAAGGTTTT GAACACGATG ATCAAGAAGA AGTGTGAAGT GAATGCTTCG ACTTTCAATA CGATATTTAG GTACATTGAG AAGAAGAGAG ACGTGAATGG CGCCCATAGG ATGTATTCGA AAATGATGGA AGCAAAATGT GAGCAGAATA CAGTGACTTA TAATATTCTG ATAAGGATGT TTGCCGGGTC GAAATCTACT GATATGGTTC TGAAGATGAA GAAGGAAATG GATGATAAAG AAGTTGAGCC AAATGTGAAT ACCTATAGGC TTCTGGTTAC GATGTTTTGT GGGATGGGAC ATTGGAATAA TGCTTATAAG TTGTTTAAAG AAATGGTTGA AGAGAAGTGT TTGACACCGA GCTTGTCTTT ATATGAGATG GTTCTTGCTC AGTTAAGAAA AGCTGGGCAA TTGAAGAAGC ATGAAGAGCT GGTGGAGAAG ATGATTCAGA AGGGACTCGT TACTCGGCCA TTATAGGAAC TTTTAAGGAT ATTTTAAAGC AATCAGATTG TAACTTTGTT TTGGGTACAA CACTTGTTAT CAAGAAGATT ATTGTACCAT GTACTCTTTT TTCGACTGTC GTTTTCTACT ATGTTGTTAT ACTTGCATCA TGTGTGTTAT ATCATAA 
Length1837
Protein Sequence
Protein Residue
Map Locationscaffold_1: 8249503.. 8251692
Download Sequence
A.thaliana
AGI-codeAT1G20300.1
DescriptionPentatricopeptide repeat (PPR) superfamily protein
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
8.48528 Ahg478388 Transducin/WD40 repeat-like superfamily protein
12.3288 Ahg918145 P-loop containing nucleoside triphosphate hydrolases superfamily protein
17.7482 Ahg473448 plastid developmental protein DAG, putative
21.7256 Ahg495674 S-adenosyl-L-methionine-dependent methyltransferases superfamily protein
23.2379 Ahg479008 Tetratricopeptide repeat (TPR)-like superfamily protein
27.0555 Ahg470252
28.1425 Ahg485282 Pentatricopeptide repeat (PPR) superfamily protein
29.1204 Ahg486143 nucleolar essential protein-related
29.2916 Ahg920538 Aldolase-type TIM barrel family protein
39.9875 Ahg470083 SET domain-containing protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression