Detail



ID : Ahg472269

Blast(Query) A.halleri   /   A.thaliana (NOT RECIPROCAL)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|472269|fgenesh2_kg.1__2223__AT5G01040.1
Sequence
TATCTTTACA TCAACAATGC CTCGACTTCA TCATTATCTC CCAAATCAAG CCTTCCTCGT CTTTTTTCTC TTCTCTTCCA TTGCCTCAGC AGCTACTGTC GAACATGTTT TCCAAGTCAA AGACGTCATG GTGAAACCGT TATGCAAGGA ACAAATGATA CCGGCAGTTA ATGGAAATCT TCCCGGTCCA ACGATCAACG TTAGAGAAGG CGACACTCTT GTGGTTCATG TCATCAACAA CTCAACTTAT AATGTAACCA TCCACTGGCA TGGAGTTTTT CAGCTGAAGA GCGTATGGAT GGACGGTGCA AATATGATAA CTCAATGTCC GATTCAACCT AGTTACAACT TCACATATCA ATTCGATATT ACCGGTCAAG AAGGTACATT GTTGTGGCAT GCACACGTCG TTAATCTACG AGCCACTCTT CACGGGGCTC TACTCATCCG TCCCCGATCC GGCCGTCCTT ATCCTTTTCC TAAACCCTAC GAGGAAGTTC CTCTCATTTT TCAACAATGG TGGGACACAG ATGTTAGACT TCTCGAAATA CGGCCAGCTC CGGTTTCTGA TGCTTACCTC ATGAATGGCC TCGCTGGAGA TTCATATCCT TGCTCTAAGA ATAGAATGTT TAACCTCAAG GTAGTACAAG GCAAAACATA CTTGCTAAGG ATTATAAACG CAGCACTCAA CACTCACCTC TTCTTCAAAA TAGCCAATCA CAACGTCACA GTTGTCGCTG TAGATGCTGT CTACACGACA CCGTACCTAA CCGATGTGAT GATCTTAACC CCGGGACAAA CCGTTGACGC ACTTCTCACC GCCGACCAGC CCATTGGAAA GTACTACATG GCCACCATCC CTTACATTAG TGCCATTGGG ATACCGACCC CTGATACCAA CCCCACCAGA GGCTTAATCG TCTACGAGGG TGCCACGTCA TCATCGCCCG TGAAGCCGTT GATGCCTGCG CCGAATGACA TACCCACCGC TCATAGGTTC TCATCAAACA TCACTAGCCT CGTGGGTGGA CCACACTGGA CACCAGTGCC TCGCCATATA GACGAGAAGA TGTTCATAAC GATGGGGCTT GGCTTAGACC CATGTCCTTC GGACATCAAA TGTATTGGAC CGTTAGGTCA AAGATATGCT GGTTCTCTCA ACAACCGCAC TTTTATGATC CCGGAGAGAA TCTCTATGCA AGAGGCTTAT TTTTACAACA TTACTGGAGT CTACACCGAC GATTTTCCCA ACCAACCACC GGTTAAATTT GATTACACAA GATTCGAACA GCGTACCAAT TCTGACTTCA AGATGATGTT TCCGGAAAGA AAGACTAGCG TCAAGACAAT TAGGTGTAAT TCTACAGTCG AGATCGTTTT GCAAAACACC GCGATACTCA CCAGGGAGAG CCACCCCATG CACCTTCATG GCTTCAACTT CTATGTGTTG GGTTATGGAT TTGGTAACTA CGATCCTGTC CGTGATGCAA GAAAGCTAAA TCTATTTAAC CCACAAATGC GTAATACCGT TGGTGTACCA CCAGGTGGAT GGGTTGTCCT CAGATTTATC GCTAATAATC CTGGTATATG GCTGTTCCAT TGTCACATGG ATGCTCATTT ACCATACGGA ATTATGATGG CTTTCATAGT TCAAAATGGG CCAACTCCAG AAACGAGCTT GCCATCTCCA CCGTCGAATC TTCCGCAATG CACTAGGGAT CCTAGGATCT ATGACTCTCC GATGACTAAT GTTGATTTGT CTTACTAAAA GTAAAATACA TTTTCAATTG GTCATTGCTT CCACATTTTT GGAAATCATT ATTTCTTAAA ATTAGTGCAC TACAATGTTT GAACTGATTT GTACGAGAAA CAATAAATTT ATTTATATAA AAATG 
Length1895
Protein Sequence
Protein Residue
Map Locationscaffold_1: 8335300.. 8338510
Download Sequence
A.thaliana
AGI-codeAT5G01040.1
Descriptionlaccase 8
TAIR curator summaryputative laccase, knockout mutant showed early flowering
Alias[LAC8][laccase 8]
Gene coexpression
MR
MR Locus Description
1 Ahg917658 subtilase 4.13
4 Ahg942130 Leucine-rich repeat (LRR) family protein
4.3589 Ahg916047
5.65685 Ahg337343
6 Ahg925744
7.74597 Ahg931324
9.16515 Ahg895302
9.21954 Ahg904884 RNA-binding protein
9.38083 Ahg890578 HSP20-like chaperone
10.8167 Ahg494580 RmlC-like cupins superfamily protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression